ENSDARG00000089967


Danio rerio

Features
Gene ID: ENSDARG00000089967
  
Biological name :si:ch211-59o9.10
  
Synonyms : si:ch211-59o9.10
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 25
Strand: -1
Band:
Gene start: 19560647
Gene end: 19574146
  
Corresponding Affymetrix probe sets: Dr.2915.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000129621
NCBI entrez gene - 561841     See in Manteia.
RefSeq - XM_001922980
swissprot - E7F6I4
ZFIN ID - ZDB-GENE-101206-1
Ensembl - ENSDARG00000089967
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rnf38 / ring finger protein 38 / Q8BI21* / Q9H0F5* / Mus musculus ring finger protein 38 (Rnf38), transcript variant 3, mRNA.*ENSDARG0000006205521
rnf44 / Q08CG8 / ring finger protein 44 / Q7L0R7*ENSDARG0000006858219
rlim / ring finger protein, LIM domain interacting / Q9NVW2* / Q9WTV7* / Mus musculus ring finger protein, LIM domain interacting (Rlim), transcript variant 2, mRNA.*ENSDARG0000007930617
rnf6 / ring finger protein (C3H2C3 type) 6 / Q9Y252* / Q9DBU5* / ring finger protein 6* / E3 ubiquitin-protein ligase RNF6 *ENSDARG0000007795515


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IBA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr