ENSDARG00000071375


Danio rerio

Features
Gene ID: ENSDARG00000071375
  
Biological name :celf5a
  
Synonyms : celf5a / cugbp, Elav-like family member 5a
  
Possible biological names infered from orthology : CELF5 / CUGBP Elav-like family member 5 / Q8N6W0
  
Species: Danio rerio
  
Chr. number: 22
Strand: -1
Band:
Gene start: 19665617
Gene end: 20011604
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000087742
Ensembl peptide - ENSDARP00000087744
NCBI entrez gene - 568052     See in Manteia.
RefSeq - NM_001130788
RefSeq Peptide - NP_001124260
swissprot - B3DJA7
swissprot - A0A288CFT5
swissprot - Q1LVH7
ZFIN ID - ZDB-GENE-050208-746
Ensembl - ENSDARG00000071375
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CELF5ENSGALG00000026716Gallus gallus
 CELF5ENSG00000161082Homo sapiens
 Celf5ENSMUSG00000034818Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
celf4 / Q6DGV1 / CUGBP, Elav-like family member 4ENSDARG0000007004567
celf5b / cugbp, Elav-like family member 5b / CELF5* / Q8N6W0* / CUGBP Elav-like family member 5*ENSDARG0000009072766
celf3b / cugbp, Elav-like family member 3b / CELF3* / Q5SZQ8* / Q8CIN6* / CUGBP Elav-like family member 3* / Mus musculus CUGBP, Elav-like family member 3 (Celf3), transcript variant 8, mRNA.*ENSDARG0000000698359
celf3a / Q9IBD1 / cugbp, Elav-like family member 3a / CELF3* / Q5SZQ8* / Q8CIN6* / CUGBP Elav-like family member 3* / Mus musculus CUGBP, Elav-like family member 3 (Celf3), transcript varia...ENSDARG0000003466859
CELF6 / si:dkey-205h23.2 / Q96J87* / AC009690.3* / CUGBP Elav-like family member 6*ENSDARG0000010193356
celf1 / Q9IBD0 / cugbp, Elav-like family member 1 / P28659* / Q92879*ENSDARG0000000531543
celf2 / Q6P0B1 / cugbp, Elav-like family member 2 / O95319* / Q9Z0H4*ENSDARG0000000213142
zgc:165603 / CELF5* / Q8N6W0* / CUGBP Elav-like family member 5*ENSDARG0000009870219
CABZ01018956.1 / CELF4* / Q7TSY6* / Q9BZC1* / CUGBP Elav-like family member 4*ENSDARG000001140496


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR034648  CELF-3/4/5/6, RNA recognition motif 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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