ENSDARG00000101933


Danio rerio

Features
Gene ID: ENSDARG00000101933
  
Biological name :CELF6
  
Synonyms : CELF6 / si:dkey-205h23.2
  
Possible biological names infered from orthology : AC009690.3 / CUGBP Elav-like family member 6 / Q7TN33 / Q96J87
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 660578
Gene end: 717350
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000131763
NCBI entrez gene - 794913     See in Manteia.
RefSeq - XM_017351973
RefSeq - XM_009293363
RefSeq - XM_017351974
RefSeq - XM_017351975
swissprot - A0A0R4ID04
ZFIN ID - ZDB-GENE-120215-101
Ensembl - ENSDARG00000101933
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000031313Gallus gallus
 AC009690.3ENSG00000273025Homo sapiens
 CELF6ENSG00000140488Homo sapiens
 Celf6ENSMUSG00000032297Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
celf4 / Q6DGV1 / CUGBP, Elav-like family member 4ENSDARG0000007004577
celf5a / cugbp, Elav-like family member 5a / CELF5* / Q8N6W0* / CUGBP Elav-like family member 5*ENSDARG0000007137568
celf3b / cugbp, Elav-like family member 3b / CELF3* / Q5SZQ8* / Q8CIN6* / CUGBP Elav-like family member 3* / Mus musculus CUGBP, Elav-like family member 3 (Celf3), transcript variant 8, mRNA.*ENSDARG0000000698367
celf3a / Q9IBD1 / cugbp, Elav-like family member 3a / CELF3* / Q5SZQ8* / Q8CIN6* / CUGBP Elav-like family member 3* / Mus musculus CUGBP, Elav-like family member 3 (Celf3), transcript varia...ENSDARG0000003466866
celf5b / cugbp, Elav-like family member 5b / CELF5* / Q8N6W0* / CUGBP Elav-like family member 5*ENSDARG0000009072749
celf1 / Q9IBD0 / cugbp, Elav-like family member 1 / P28659* / Q92879*ENSDARG0000000531546
celf2 / Q6P0B1 / cugbp, Elav-like family member 2 / O95319* / Q9Z0H4*ENSDARG0000000213145
zgc:165603 / CELF5* / Q8N6W0* / CUGBP Elav-like family member 5*ENSDARG0000009870218
CABZ01018956.1 / CELF4* / Q7TSY6* / Q9BZC1* / CUGBP Elav-like family member 4*ENSDARG000001140498


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR034648  CELF-3/4/5/6, RNA recognition motif 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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