ENSDARG00000092064


Danio rerio

Features
Gene ID: ENSDARG00000092064
  
Biological name :si:dkey-117n7.4
  
Synonyms : si:dkey-117n7.4
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 4
Strand: 1
Band:
Gene start: 15954293
Gene end: 15964030
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000123622
swissprot - Q1LYN9
ZFIN ID - ZDB-GENE-060503-237
Ensembl - ENSDARG00000092064
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
col4a5 / collagen, type IV, alpha 5 (Alport syndrome) / P29400* / collagen, type IV, alpha 5* / collagen type IV alpha 5 chain*ENSDARG0000005206335
col4a1 / collagen, type IV, alpha 1 / P02462* / P02463* / collagen type IV alpha 1 chain* / Collagen alpha-1(IV) chain Arresten*ENSDARG0000005500935
col4a6 / collagen, type IV, alpha 6 / Q14031* / collagen type IV alpha 6 chain*ENSDARG0000005206133
col4a3 / collagen, type IV, alpha 3 / Q01955* / Q9QZS0* / collagen type IV alpha 3 chain* / Collagen alpha-3(IV) chain Tumstatin*ENSDARG0000000339532
col4a4 / collagen, type IV, alpha 4 / Q9QZR9* / P53420* / Collagen alpha-4(IV) chain * / collagen type IV alpha 4 chain*ENSDARG0000000283131
col16a1 / collagen, type XVI, alpha 1 / Q8BLX7* / Q07092* / Collagen alpha-1(XVI) chain * / collagen type XVI alpha 1 chain*ENSDARG0000000919431
col4a2 / collagen, type IV, alpha 2 / P08122* / P08572* / collagen type IV alpha 2 chain* / Collagen alpha-2(IV) chain Canstatin*ENSDARG0000010411031
col19a1 / collagen, type XIX, alpha 1ENSDARG0000007616312
si:ch211-106n13.3ENSDARG0000005263310
col21a1 / collagen, type XXI, alpha 1 / Q96P44* / collagen type XXI alpha 1 chain*ENSDARG000000253208
zmp:0000000760ENSDARG000000747456
si:dkey-225n22.4ENSDARG000000772451


Protein motifs (from Interpro)
Interpro ID Name
 IPR008160  Collagen triple helix repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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