ENSDARG00000101665


Danio rerio

Features
Gene ID: ENSDARG00000101665
  
Biological name :pcdh1g11
  
Synonyms : pcdh1g11 / protocadherin 1 gamma 11
  
Possible biological names infered from orthology : PCDHGA1 / Pcdhga12 / Pcdhga2 / PCDHGA9 / PCDHGB1 / PCDHGB2 / PCDHGB3 / PCDHGB4 / PCDHGB5 / PCDHGB6 / PCDHGB7 / Pcdhgb8 / protocadherin gamma subfamily A, 1 / protocadherin gamma subfamily A, 2 / protocadherin gamma subfamily A, 9 / protocadherin gamma subfamily B, 1 / protocadherin gamma subfamily B, 2 / protocadherin gamma subfamily B, 3 / protocadherin gamma subfamily B, 4 / protocadherin gamma subfamily B, 5 / protocadherin gamma subfamily B, 6 / protocadherin gamma subfamily B, 7 / protocadherin gamma subfamily B, 8 / Q9UN71 / Q9Y5F8 / Q9Y5F9 / Q9Y5G0 / Q9Y5G1 / Q9Y5G2 / Q9Y5G3 / Q9Y5G4 / Q9Y5H4
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 21708463
Gene end: 21820133
  
Corresponding Affymetrix probe sets: Dr.8598.1.A1_at (Zebrafish Array)   NM_001024111_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000131275
Ensembl peptide - ENSDARP00000152911
NCBI entrez gene - 553999     See in Manteia.
RefSeq - NM_001024111
RefSeq Peptide - NP_001019282
Ensembl - ENSDARG00000101665
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000038029Gallus gallus
 Q9UN71ENSG00000253953Homo sapiens
 Q9Y5F8ENSG00000254122Homo sapiens
 Q9Y5F9ENSG00000253305Homo sapiens
 Q9Y5G0ENSG00000276547Homo sapiens
 Q9Y5G1ENSG00000262209Homo sapiens
 Q9Y5G2ENSG00000253910Homo sapiens
 Q9Y5G3ENSG00000254221Homo sapiens
 Q9Y5G4ENSG00000261934Homo sapiens
 Q9Y5H4ENSG00000204956Homo sapiens
 Pcdhga1ENSMUSG00000103144Mus musculus
 Pcdhga12ENSMUSG00000102428Mus musculus
 Pcdhga2ENSMUSG00000103332Mus musculus
 Pcdhgb1ENSMUSG00000103037Mus musculus
 Pcdhgb2ENSMUSG00000102748Mus musculus
 Pcdhgb4ENSMUSG00000103585Mus musculus
 Pcdhgb5ENSMUSG00000103749Mus musculus
 Pcdhgb6ENSMUSG00000103088Mus musculus
 Pcdhgb7ENSMUSG00000104063Mus musculus
 Pcdhgb8ENSMUSG00000103081Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CT737184.2 / Q9Y5H4* / Q9UN71* / Q9Y5F8* / Q9Y5F9* / Q9Y5G0* / Q9Y5G1* / Q9Y5G2* / Q9Y5G3* / Q9Y5G4* / PCDHGB7* / PCDHGA1* / PCDHGA9* / PCDHGB1* / PCDHGB2* / PCDHGB3* / PCDHGB4* / PCDHGB5* ...ENSDARG0000011293052
pcdh1g13 / protocadherin 1 gamma 13 / Q9Y5H4* / Q9UN71* / Q9Y5F8* / Q9Y5F9* / Q9Y5G0* / Q9Y5G1* / Q9Y5G2* / Q9Y5G3* / Q9Y5G4* / PCDHGB7* / Pcdhgb8* / PCDHGA1* / Pcdhga2* / PCDHGA9* / PCDHGB...ENSDARG0000009896350
pcdh1g1 / protocadherin 1 gamma 1 / Q9Y5H4* / Q9UN71* / Q9Y5F8* / Q9Y5F9* / Q9Y5G0* / Q9Y5G1* / Q9Y5G2* / Q9Y5G3* / Q9Y5G4* / PCDHGB7* / Pcdhgb8* / PCDHGA1* / Pcdhga2* / PCDHGA9* / PCDHGB1*...ENSDARG0000010400750
pcdh1g14 / protocadherin 1 gamma 14 / Q9Y5H4* / Q9UN71* / Q9Y5F8* / Q9Y5F9* / Q9Y5G0* / Q9Y5G1* / Q9Y5G2* / Q9Y5G3* / Q9Y5G4* / PCDHGB7* / Pcdhgb8* / PCDHGA1* / Pcdhga2* / PCDHGA9* / PCDHGB...ENSDARG0000010405749
pcdh1gc5 / pcdh1gc6 / protocadherin 1 gamma c 5 / Q9Y5F6* / Q9Y5F7* / PCDHGC5* / PCDHGC4* / protocadherin gamma subfamily C, 4* / protocadherin gamma subfamily C, 5*ENSDARG0000010482648
pcdh1g33 / protocadherin 1 gamma 33 / Q9Y5F6* / Q9Y5F7* / PCDHGC5* / PCDHGC4* / protocadherin gamma subfamily C, 4* / protocadherin gamma subfamily C, 5*ENSDARG0000009903547
pcdh1gc6 / protocadherin 1 gamma c 6 / Q9Y5F6* / Q9Y5F7* / PCDHGC5* / PCDHGC4* / protocadherin gamma subfamily C, 4* / protocadherin gamma subfamily C, 5*ENSDARG0000010395047
pcdh1g26 / protocadherin 1 gamma 26 / Q9Y5F6* / Q9Y5F7* / PCDHGC5* / PCDHGC4* / protocadherin gamma subfamily C, 4* / protocadherin gamma subfamily C, 5*ENSDARG0000009993146
pcdh1g29 / protocadherin 1 gamma 29 / Q9Y5F6* / Q9Y5F7* / PCDHGC5* / PCDHGC4* / protocadherin gamma subfamily C, 4* / protocadherin gamma subfamily C, 5*ENSDARG0000010449746
si:ch73-233f7.4 / PCDHGC3 (1 of many) / Q9UN70* / PCDHGC3* / protocadherin gamma subfamily C, 3*ENSDARG0000009856632
si:ch73-233f7.7 / Q9UN70* / PCDHGC3* / protocadherin gamma subfamily C, 3*ENSDARG0000009948732
pcdhb / protocadherin b / Q9UN70* / PCDHGC3* / protocadherin gamma subfamily C, 3*ENSDARG0000007702331
BX957322.1 / Q9UN70* / PCDHGC3* / protocadherin gamma subfamily C, 3*ENSDARG0000008956231
si:ch73-233f7.6 / PCDHGC3 (1 of many) / Q9UN70* / PCDHGC3* / protocadherin gamma subfamily C, 3*ENSDARG0000010166731
si:ch73-233f7.3 / PCDHGC3 (1 of many) / Q9UN70* / PCDHGC3* / protocadherin gamma subfamily C, 3*ENSDARG0000010219831


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR013164  Cadherin, N-terminal
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR031904  Cadherin, C-terminal catenin-binding domain
 IPR032455  Cadherin, cytoplasmic C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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