ENSDARG00000101984


Danio rerio

Features
Gene ID: ENSDARG00000101984
  
Biological name :pde6gb
  
Synonyms : pde6gb / phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b
  
Possible biological names infered from orthology : P09174 / P18545 / PDE6G / phosphodiesterase 6G / phosphodiesterase 6G, cGMP-specific, rod, gamma
  
Species: Danio rerio
  
Chr. number: 12
Strand: -1
Band:
Gene start: 35980541
Gene end: 35988586
  
Corresponding Affymetrix probe sets: Dr.9829.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000134212
NCBI entrez gene - 554700     See in Manteia.
RefSeq - NM_001243082
RefSeq Peptide - NP_001230011
RefSeq Peptide - NP_997964
swissprot - Q7ZVI5
ZFIN ID - ZDB-GENE-030904-1
Ensembl - ENSDARG00000101984
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PDE6GENSGALG00000004514Gallus gallus
 PDE6GENSG00000185527Homo sapiens
 Pde6gENSMUSG00000025386Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pde6ga / phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog aENSDARG0000005679172
CR394572.1ENSDARG0000011526861
pde6ha / phosphodiesterase 6H, cGMP-specific, cone, gamma, paralog aENSDARG0000010255859


Protein motifs (from Interpro)
Interpro ID Name
 IPR006952  Retinal cGMP phosphodiesterase, gamma subunit


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007601 visual perception IEA
 molecular_functionGO:0004114 3",5"-cyclic-nucleotide phosphodiesterase activity IEA
 molecular_functionGO:0030553 cGMP binding IEA


Pathways (from Reactome)
Pathway description
Activation of the phototransduction cascade
Inactivation, recovery and regulation of the phototransduction cascade
Ca2+ pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000000380 pde6a / phosphodiesterase 6A, cGMP-specific, rod, alpha / P16499* / phosphodiesterase 6A*  / complex
 ENSDARG00000044199 gnat1 / guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1 / P20612* / P11488* / G protein subunit alpha transducin 1* / guanine nucleotide binding pro...  / complex
 ENSDARG00000042529 gnat2 / guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 / P50149* / P19087* / G protein subunit alpha transducin 2* / guanine nucleotide binding pro...  / complex
 ENSDARG00000011671 pde6b / phosphodiesterase 6B, cGMP-specific, rod, beta / P35913* / P23440* / phosphodiesterase 6B* / phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide*  / complex
 ENSDARG00000101984 pde6gb / phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b / PDE6G* / P18545* / phosphodiesterase 6G*  / complex






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr