ENSG00000169744


Homo sapiens

Features
Gene ID: ENSG00000169744
  
Biological name :LDB2
  
Synonyms : LDB2 / LIM domain binding 2 / O43679
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 4
Strand: -1
Band: p15.32
Gene start: 16501541
Gene end: 16898809
  
Corresponding Affymetrix probe sets: 206481_s_at (Human Genome U133 Plus 2.0 Array)   242360_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000422552
Ensembl peptide - ENSP00000421767
Ensembl peptide - ENSP00000423963
Ensembl peptide - ENSP00000425754
Ensembl peptide - ENSP00000424770
Ensembl peptide - ENSP00000424676
Ensembl peptide - ENSP00000306772
Ensembl peptide - ENSP00000392089
NCBI entrez gene - 9079     See in Manteia.
OMIM - 603450
RefSeq - XM_017008822
RefSeq - XM_011513905
RefSeq - XM_017008812
RefSeq - XM_017008813
RefSeq - XM_017008814
RefSeq - XM_017008815
RefSeq - XM_017008816
RefSeq - XM_017008817
RefSeq - XM_017008818
RefSeq - XM_017008819
RefSeq - XM_017008820
RefSeq - XM_017008821
RefSeq - NM_001130834
RefSeq - NM_001290
RefSeq - NM_001304434
RefSeq - NM_001304435
RefSeq - XM_005248197
RefSeq - XM_005248201
RefSeq - XM_005248202
RefSeq - XM_006713975
RefSeq - XM_006713976
RefSeq - XM_006713977
RefSeq - XM_006713978
RefSeq - XM_006713979
RefSeq - XM_006713980
RefSeq - XM_006713981
RefSeq - XM_006713982
RefSeq - XM_006713983
RefSeq Peptide - NP_001281
RefSeq Peptide - NP_001291363
RefSeq Peptide - NP_001291364
RefSeq Peptide - NP_001124306
swissprot - H0YA09
swissprot - D6RAT1
swissprot - E9PGU0
swissprot - O43679
swissprot - E9PFI4
swissprot - E7EX95
swissprot - G5E9Y7
Ensembl - ENSG00000169744
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ldb2aENSDARG00000019579Danio rerio
 ldb2bENSDARG00000034896Danio rerio
 LDB2ENSGALG00000014485Gallus gallus
 Ldb2ENSMUSG00000039706Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LDB1 / Q86U70 / LIM domain binding 1ENSG0000019872874


Protein motifs (from Interpro)
Interpro ID Name
 IPR029005  LIM-domain binding protein/SEUSS
 IPR030174  LIM domain-binding protein 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001942 hair follicle development IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0010669 epithelial structure maintenance IEA
 biological_processGO:0030334 regulation of cell migration IEA
 biological_processGO:0035019 somatic stem cell population maintenance IEA
 biological_processGO:0043549 regulation of kinase activity IEA
 biological_processGO:0044089 positive regulation of cellular component biogenesis IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005667 transcription factor complex IEA
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0031252 cell leading edge IEA
 molecular_functionGO:0000989 transcription factor activity, transcription factor binding IEA
 molecular_functionGO:0003712 transcription coregulator activity TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0019899 enzyme binding IEA
 molecular_functionGO:0030274 LIM domain binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr