ENSGALG00000003443


Gallus gallus

Features
Gene ID: ENSGALG00000003443
  
Biological name :LRRC52
  
Synonyms : leucine rich repeat containing 52 / LRRC52
  
Possible biological names infered from orthology : Leucine-rich repeat-containing protein 52 / Q5M8M9 / Q8N7C0
  
Species: Gallus gallus
  
Chr. number: 8
Strand: 1
Band:
Gene start: 5482024
Gene end: 5484083
  
Corresponding Affymetrix probe sets: GgaAffx.25863.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000005441
Ensembl peptide - ENSGALP00000045038
NCBI entrez gene - 770767     See in Manteia.
RefSeq - XM_001234093
swissprot - A0A1D5NXE3
swissprot - E1C2A3
Ensembl - ENSGALG00000003443
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CABZ01112864.1ENSDARG00000099937Danio rerio
 LRRC52ENSDARG00000090698Danio rerio
 LRRC52ENSG00000162763Homo sapiens
 Lrrc52ENSMUSG00000040485Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LRRC38 / leucine rich repeat containing 38 / A2VDH3* / Q5VT99* / Leucine-rich repeat-containing protein 38 *ENSGALG0000000409728
LRRC55 / leucine rich repeat containing 55 / Q3UY51* / Q6ZSA7* / Leucine-rich repeat-containing protein 55 *ENSGALG0000002913028
LRTM2 / leucine rich repeats and transmembrane domains 2 / Q8BGX3* / Q8N967* / Leucine-rich repeat and transmembrane domain-containing protein 2 *ENSGALG0000002621424
LRRC26* / Q2I0M4* / Q91W20* / leucine rich repeat containing 26* / Leucine-rich repeat-containing protein 26 *ENSGALG0000004590123
RTN4RL1 / reticulon 4 receptor like 1 / Q86UN2* / Q8K0S5*ENSGALG0000002158922
RTN4R* / Q99PI8* / Q9BZR6* / reticulon 4 receptor*ENSGALG0000000773220
LRTM1 / leucine rich repeats and transmembrane domains 1 / Q8BXQ3* / Q9HBL6* / Leucine-rich repeat and transmembrane domain-containing protein 1 *ENSGALG0000000540419
RTN4RL2 / reticulon 4 receptor like 2 / Q7M6Z0* / Q86UN3*ENSGALG0000003290319


Protein motifs (from Interpro)
Interpro ID Name
 IPR000372  Leucine-rich repeat N-terminal domain
 IPR000483  Cysteine-rich flanking region, C-terminal
 IPR001611  Leucine-rich repeat
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006813 potassium ion transport IEA
 biological_processGO:0022414 reproductive process IEA
 biological_processGO:0071805 potassium ion transmembrane transport IEA
 biological_processGO:1903818 positive regulation of voltage-gated potassium channel activity IEA
 cellular_componentGO:0008076 voltage-gated potassium channel complex IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005249 voltage-gated potassium channel activity IEA
 molecular_functionGO:0005267 potassium channel activity IEA
 molecular_functionGO:0044325 ion channel binding IEA
 molecular_functionGO:0099104 potassium channel activator activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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