ENSGALG00000026214


Gallus gallus

Features
Gene ID: ENSGALG00000026214
  
Biological name :LRTM2
  
Synonyms : leucine rich repeats and transmembrane domains 2 / LRTM2
  
Possible biological names infered from orthology : Leucine-rich repeat and transmembrane domain-containing protein 2 / Q8BGX3 / Q8N967
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 61076893
Gene end: 61086163
  
Corresponding Affymetrix probe sets: GgaAffx.8249.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000041980
NCBI entrez gene - 101749866     See in Manteia.
RefSeq - XM_004937941
swissprot - R4GIN9
Ensembl - ENSGALG00000026214
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lrtm2aENSDARG00000045483Danio rerio
 lrtm2bENSDARG00000045811Danio rerio
 LRTM2ENSG00000166159Homo sapiens
 Lrtm2ENSMUSG00000055003Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LRTM1 / leucine rich repeats and transmembrane domains 1 / Q8BXQ3* / Q9HBL6* / Leucine-rich repeat and transmembrane domain-containing protein 1 *ENSGALG0000000540426
RTN4RL1 / reticulon 4 receptor like 1 / Q86UN2* / Q8K0S5*ENSGALG0000002158917
LRRC55 / leucine rich repeat containing 55 / Q3UY51* / Q6ZSA7* / Leucine-rich repeat-containing protein 55 *ENSGALG0000002913017
LRRC52 / leucine rich repeat containing 52 / Q5M8M9* / Q8N7C0* / Leucine-rich repeat-containing protein 52 *ENSGALG0000000344316
LRRC38 / leucine rich repeat containing 38 / A2VDH3* / Q5VT99* / Leucine-rich repeat-containing protein 38 *ENSGALG0000000409716
RTN4RL2 / reticulon 4 receptor like 2 / Q7M6Z0* / Q86UN3*ENSGALG0000003290316
RTN4R* / Q99PI8* / Q9BZR6* / reticulon 4 receptor*ENSGALG0000000773215
LRRC26* / Q2I0M4* / Q91W20* / leucine rich repeat containing 26* / Leucine-rich repeat-containing protein 26 *ENSGALG0000004590114


Protein motifs (from Interpro)
Interpro ID Name
 IPR000372  Leucine-rich repeat N-terminal domain
 IPR000483  Cysteine-rich flanking region, C-terminal
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007409 axonogenesis IBA
 biological_processGO:0051965 positive regulation of synapse assembly IEA
 cellular_componentGO:0005615 extracellular space IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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