ENSMUSG00000055003


Mus musculus

Features
Gene ID: ENSMUSG00000055003
  
Biological name :Lrtm2
  
Synonyms : Leucine-rich repeat and transmembrane domain-containing protein 2 / Lrtm2 / Q8BGX3
  
Possible biological names infered from orthology : leucine rich repeats and transmembrane domains 2 / Q8N967
  
Species: Mus musculus
  
Chr. number: 6
Strand: -1
Band: F1
Gene start: 119315133
Gene end: 119330766
  
Corresponding Affymetrix probe sets: 10547381 (MoGene1.0st)   1433744_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000063882
Ensembl peptide - ENSMUSP00000108376
Ensembl peptide - ENSMUSP00000115884
Ensembl peptide - ENSMUSP00000126661
NCBI entrez gene - 211187     See in Manteia.
MGI - MGI:2141485
RefSeq - XM_011241276
RefSeq - NM_001172207
RefSeq - NM_172492
RefSeq - XM_006505849
RefSeq Peptide - NP_766080
RefSeq Peptide - NP_001165678
swissprot - Q8BGX3
swissprot - D3YY28
Ensembl - ENSMUSG00000055003
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lrtm2aENSDARG00000045483Danio rerio
 lrtm2bENSDARG00000045811Danio rerio
 LRTM2ENSGALG00000026214Gallus gallus
 LRTM2ENSG00000166159Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Lrtm1 / Q8BXQ3 / Leucine-rich repeat and transmembrane domain-containing protein 1 / Q9HBL6* / leucine rich repeats and transmembrane domains 1*ENSMUSG0000004577633
Q7M6Z0 / Rtn4rl2 / Reticulon-4 receptor-like 2 / Q86UN3*ENSMUSG0000005089624
Lrrc55 / Q3UY51 / Leucine-rich repeat-containing protein 55 / Q6ZSA7* / leucine rich repeat containing 55*ENSMUSG0000007522424
Lrrc24 / Q8BHA1 / Leucine-rich repeat-containing protein 24 / Q50LG9* / leucine rich repeat containing 24*ENSMUSG0000003370723
Lrrc26 / Q91W20 / Leucine-rich repeat-containing protein 26 / Q2I0M4* / leucine rich repeat containing 26*ENSMUSG0000002696122
Rtn4r / Q99PI8 / Reticulon-4 receptor / Q9BZR6*ENSMUSG0000004381121
Lrrc52 / Q5M8M9 / Leucine-rich repeat-containing protein 52 / Q8N7C0* / leucine rich repeat containing 52*ENSMUSG0000004048520
A2VDH3 / Lrrc38 / Leucine-rich repeat-containing protein 38 / Q5VT99* / leucine rich repeat containing 38*ENSMUSG0000002858419
Q8K0S5 / Rtn4rl1 / Reticulon-4 receptor-like 1 / Q86UN2*ENSMUSG0000004528719


Protein motifs (from Interpro)
Interpro ID Name
 IPR000372  Leucine-rich repeat N-terminal domain
 IPR000483  Cysteine-rich flanking region, C-terminal
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006469 negative regulation of protein kinase activity IBA
 biological_processGO:0019221 cytokine-mediated signaling pathway IBA
 biological_processGO:0046426 negative regulation of JAK-STAT cascade IBA
 biological_processGO:0051965 positive regulation of synapse assembly IDA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004860 protein kinase inhibitor activity IBA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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