ENSMUSG00000045776


Mus musculus

Features
Gene ID: ENSMUSG00000045776
  
Biological name :Lrtm1
  
Synonyms : Leucine-rich repeat and transmembrane domain-containing protein 1 / Lrtm1 / Q8BXQ3
  
Possible biological names infered from orthology : leucine rich repeats and transmembrane domains 1 / Q9HBL6
  
Species: Mus musculus
  
Chr. number: 14
Strand: 1
Band: A3
Gene start: 29018208
Gene end: 29033645
  
Corresponding Affymetrix probe sets: 10413492 (MoGene1.0st)   1443866_at (Mouse Genome 430 2.0 Array)   1444429_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000061828
Ensembl peptide - ENSMUSP00000153518
Ensembl peptide - ENSMUSP00000153372
NCBI entrez gene - 319476     See in Manteia.
MGI - MGI:2442106
RefSeq - NM_176920
RefSeq Peptide - NP_795894
swissprot - A0A286YE57
swissprot - A0A286YDD9
swissprot - A6H6T2
swissprot - Q8BXQ3
Ensembl - ENSMUSG00000045776
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lrtm1ENSDARG00000098742Danio rerio
 LRTM1ENSGALG00000005404Gallus gallus
 LRTM1ENSG00000144771Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Lrtm2 / Q8BGX3 / Leucine-rich repeat and transmembrane domain-containing protein 2 / Q8N967* / leucine rich repeats and transmembrane domains 2*ENSMUSG0000005500334
Lrrc24 / Q8BHA1 / Leucine-rich repeat-containing protein 24 / Q50LG9* / leucine rich repeat containing 24*ENSMUSG0000003370722
Q7M6Z0 / Rtn4rl2 / Reticulon-4 receptor-like 2 / Q86UN3*ENSMUSG0000005089622
Lrrc26 / Q91W20 / Leucine-rich repeat-containing protein 26 / Q2I0M4* / leucine rich repeat containing 26*ENSMUSG0000002696121
Lrrc55 / Q3UY51 / Leucine-rich repeat-containing protein 55 / Q6ZSA7* / leucine rich repeat containing 55*ENSMUSG0000007522421
A2VDH3 / Lrrc38 / Leucine-rich repeat-containing protein 38 / Q5VT99* / leucine rich repeat containing 38*ENSMUSG0000002858420
Q8K0S5 / Rtn4rl1 / Reticulon-4 receptor-like 1 / Q86UN2*ENSMUSG0000004528720
Rtn4r / Q99PI8 / Reticulon-4 receptor / Q9BZR6*ENSMUSG0000004381119
Lrrc52 / Q5M8M9 / Leucine-rich repeat-containing protein 52 / Q8N7C0* / leucine rich repeat containing 52*ENSMUSG0000004048518


Protein motifs (from Interpro)
Interpro ID Name
 IPR000372  Leucine-rich repeat N-terminal domain
 IPR000483  Cysteine-rich flanking region, C-terminal
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006469 negative regulation of protein kinase activity IBA
 biological_processGO:0019221 cytokine-mediated signaling pathway IBA
 biological_processGO:0046426 negative regulation of JAK-STAT cascade IBA
 biological_processGO:0051965 positive regulation of synapse assembly IDA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004860 protein kinase inhibitor activity IBA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr