ENSGALG00000029130


Gallus gallus

Features
Gene ID: ENSGALG00000029130
  
Biological name :LRRC55
  
Synonyms : leucine rich repeat containing 55 / LRRC55
  
Possible biological names infered from orthology : Leucine-rich repeat-containing protein 55 / Q3UY51 / Q6ZSA7
  
Species: Gallus gallus
  
Chr. number: 5
Strand: -1
Band:
Gene start: 17059708
Gene end: 17060659
  
Corresponding Affymetrix probe sets: Gga.13918.1.S1_at (Chicken Array)   GgaAffx.4696.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000042410
NCBI entrez gene - 100858394     See in Manteia.
RefSeq - XM_003641378
swissprot - R4GJT6
Ensembl - ENSGALG00000029130
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LRRC55ENSG00000183908Homo sapiens
 Lrrc55ENSMUSG00000075224Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LRRC38 / leucine rich repeat containing 38 / A2VDH3* / Q5VT99* / Leucine-rich repeat-containing protein 38 *ENSGALG0000000409734
LRRC52 / leucine rich repeat containing 52 / Q5M8M9* / Q8N7C0* / Leucine-rich repeat-containing protein 52 *ENSGALG0000000344329
LRTM2 / leucine rich repeats and transmembrane domains 2 / Q8BGX3* / Q8N967* / Leucine-rich repeat and transmembrane domain-containing protein 2 *ENSGALG0000002621426
RTN4RL2 / reticulon 4 receptor like 2 / Q7M6Z0* / Q86UN3*ENSGALG0000003290326
LRTM1 / leucine rich repeats and transmembrane domains 1 / Q8BXQ3* / Q9HBL6* / Leucine-rich repeat and transmembrane domain-containing protein 1 *ENSGALG0000000540423
RTN4RL1 / reticulon 4 receptor like 1 / Q86UN2* / Q8K0S5*ENSGALG0000002158923
LRRC26* / Q2I0M4* / Q91W20* / leucine rich repeat containing 26* / Leucine-rich repeat-containing protein 26 *ENSGALG0000004590123
RTN4R* / Q99PI8* / Q9BZR6* / reticulon 4 receptor*ENSGALG0000000773221


Protein motifs (from Interpro)
Interpro ID Name
 IPR000372  Leucine-rich repeat N-terminal domain
 IPR000483  Cysteine-rich flanking region, C-terminal
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007409 axonogenesis IBA
 biological_processGO:0071805 potassium ion transmembrane transport IEA
 biological_processGO:1903818 positive regulation of voltage-gated potassium channel activity IEA
 cellular_componentGO:0005615 extracellular space IBA
 cellular_componentGO:0008076 voltage-gated potassium channel complex IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005249 voltage-gated potassium channel activity IEA
 molecular_functionGO:0044325 ion channel binding IEA
 molecular_functionGO:0099104 potassium channel activator activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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