ENSGALG00000005378


Gallus gallus

Features
Gene ID: ENSGALG00000005378
  
Biological name :ARNTL
  
Synonyms : ARNTL / Aryl hydrocarbon receptor nuclear translocator-like protein 1 / Q9I8T7
  
Possible biological names infered from orthology : aryl hydrocarbon receptor nuclear translocator like / Mus musculus aryl hydrocarbon receptor nuclear translocator-like (Arntl), transcript variant 3, mRNA. / O00327 / Q9WTL8
  
Species: Gallus gallus
  
Chr. number: 5
Strand: -1
Band:
Gene start: 7560411
Gene end: 7605351
  
Corresponding Affymetrix probe sets: Gga.1329.1.S1_at (Chicken Array)   Gga.1329.1.S2_at (Chicken Array)   Gga.18875.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000008620
Ensembl peptide - ENSGALP00000043635
NCBI entrez gene - 374115     See in Manteia.
RefSeq - XM_015286336
RefSeq - NM_001001463
RefSeq - XM_015286334
RefSeq - XM_015286335
RefSeq - XM_015286330
RefSeq - XM_015286331
RefSeq - XM_015286333
RefSeq Peptide - NP_001001463
swissprot - Q9I8T7
Ensembl - ENSGALG00000005378
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 arntl1aENSDARG00000006791Danio rerio
 arntl1bENSDARG00000035732Danio rerio
 ARNTLENSG00000133794Homo sapiens
 ArntlENSMUSG00000055116Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ARNTL2 / aryl hydrocarbon receptor nuclear translocator-like protein 2 / Q2VPD4* / Q8WYA1* / aryl hydrocarbon receptor nuclear translocator like 2*ENSGALG0000001409652
ARNT / aryl hydrocarbon receptor nuclear translocator / P27540* / P53762*ENSGALG0000000075133
ARNT2 / aryl hydrocarbon receptor nuclear translocator 2 / Q61324* / Q9HBZ2*ENSGALG0000000644530
CLOCK / circadian locomoter output cycles protein kaput isoform 1 / O08785* / O15516* / clock circadian regulator* / Circadian locomoter output cycles protein kaput *ENSGALG0000001379321
NPAS2 / neuronal PAS domain-containing protein 2 / Q99743* / neuronal PAS domain protein 2*ENSGALG0000001677421
HIF1A / hypoxia-inducible factor 1-alpha / Q16665* / Q61221* / hypoxia inducible factor 1 alpha subunit*ENSGALG0000001187019
ENSGALG0000000906318
EPAS1 / endothelial PAS domain protein 1 / P97481* / Q99814* / Endothelial PAS domain-containing protein 1 *ENSGALG0000001000518
SIM1 / single-minded family bHLH transcription factor 1 / P81133* / Q61045* / Single-minded homolog 1 *ENSGALG0000001546617
NPAS3 / neuronal PAS domain protein 3 / Q8IXF0*ENSGALG0000002902217
SIM2 / single-minded family bHLH transcription factor 2 / Q14190* / Q61079* / Single-minded homolog 2 *ENSGALG0000001604416


Protein motifs (from Interpro)
Interpro ID Name
 IPR000014  PAS domain
 IPR001067  Nuclear translocator
 IPR001610  PAC motif
 IPR011598  Myc-type, basic helix-loop-helix (bHLH) domain
 IPR013767  PAS fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000060 protein import into nucleus, translocation IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0007623 circadian rhythm IDA
 biological_processGO:0032007 negative regulation of TOR signaling IEA
 biological_processGO:0032922 circadian regulation of gene expression IEA
 biological_processGO:0042176 regulation of protein catabolic process IEA
 biological_processGO:0042634 regulation of hair cycle IEA
 biological_processGO:0042753 positive regulation of circadian rhythm IEA
 biological_processGO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEA
 biological_processGO:0045599 negative regulation of fat cell differentiation IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated ISS
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0048511 rhythmic process IEA
 biological_processGO:0050767 regulation of neurogenesis IEA
 biological_processGO:0050796 regulation of insulin secretion IEA
 biological_processGO:0051726 regulation of cell cycle IEA
 biological_processGO:0051775 response to redox state ISS
 biological_processGO:0060137 maternal process involved in parturition IEA
 biological_processGO:0090263 positive regulation of canonical Wnt signaling pathway IEA
 biological_processGO:0090403 oxidative stress-induced premature senescence IEA
 biological_processGO:1901985 positive regulation of protein acetylation ISS
 biological_processGO:2000074 regulation of type B pancreatic cell development IEA
 biological_processGO:2000323 negative regulation of glucocorticoid receptor signaling pathway IEA
 biological_processGO:2000772 regulation of cellular senescence IEA
 biological_processGO:2001016 positive regulation of skeletal muscle cell differentiation IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005667 transcription factor complex IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016604 nuclear body IEA
 cellular_componentGO:0016605 PML body IEA
 cellular_componentGO:0033391 chromatoid body IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0000976 transcription regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0000982 transcription factor activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001046 core promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001047 core promoter binding IEA
 molecular_functionGO:0001190 transcriptional activator activity, RNA polymerase II transcription factor binding IEA
 molecular_functionGO:0003677 DNA binding ISS
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0017162 aryl hydrocarbon receptor binding IEA
 molecular_functionGO:0043425 bHLH transcription factor binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA
 molecular_functionGO:0046983 protein dimerization activity IEA
 molecular_functionGO:0051879 Hsp90 protein binding IEA
 molecular_functionGO:0070491 repressing transcription factor binding IEA
 molecular_functionGO:0070888 E-box binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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