ENSGALG00000006207


Gallus gallus

Features
Gene ID: ENSGALG00000006207
  
Biological name :HM13
  
Synonyms : histocompatibility minor 13 / HM13
  
Possible biological names infered from orthology : H13 / Minor histocompatibility antigen H13 / Q8TCT9 / Q9D8V0
  
Species: Gallus gallus
  
Chr. number: 20
Strand: 1
Band:
Gene start: 10191698
Gene end: 10203790
  
Corresponding Affymetrix probe sets: Gga.6029.1.S1_at (Chicken Array)   Gga.6029.1.S1_s_at (Chicken Array)   GgaAffx.3869.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000010006
Ensembl peptide - ENSGALP00000056617
Ensembl peptide - ENSGALP00000053149
Ensembl peptide - ENSGALP00000050271
NCBI entrez gene - 100859573     See in Manteia.
RefSeq - XM_003642489
RefSeq - XM_004947155
RefSeq - XM_015296446
swissprot - A0A1D5PUL3
swissprot - F1NXN9
swissprot - A0A1D5PK00
swissprot - A0A1D5PBY9
Ensembl - ENSGALG00000006207
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hm13ENSDARG00000037846Danio rerio
 HM13ENSG00000101294Homo sapiens
 H13ENSMUSG00000019188Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SPPL3 / signal peptide peptidase like 3 / Q8TCT6* / Q9CUS9*ENSGALG0000000697925
SPPL2A / signal peptide peptidase-like 2A precursor / Q8TCT8* / Q9JJF9* / signal peptide peptidase like 2A*ENSGALG0000003134824
SPPL2B / signal peptide peptidase-like 2B precursor / Q3TD49* / Q8TCT7* / signal peptide peptidase like 2B*ENSGALG0000000043023


Protein motifs (from Interpro)
Interpro ID Name
 IPR006639  Presenilin/signal peptide peptidase
 IPR007369  Peptidase A22B, signal peptide peptidase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0033619 membrane protein proteolysis IEA
 biological_processGO:1904211 membrane protein proteolysis involved in retrograde protein transport, ER to cytosol IEA
 cellular_componentGO:0005765 lysosomal membrane IBA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0005791 rough endoplasmic reticulum IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030660 Golgi-associated vesicle membrane IBA
 cellular_componentGO:0036513 Derlin-1 retrotranslocation complex IEA
 cellular_componentGO:0071458 integral component of cytoplasmic side of endoplasmic reticulum membrane IEA
 cellular_componentGO:0071556 integral component of lumenal side of endoplasmic reticulum membrane IEA
 molecular_functionGO:0004190 aspartic-type endopeptidase activity IEA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0031625 ubiquitin protein ligase binding IEA
 molecular_functionGO:0042500 aspartic endopeptidase activity, intramembrane cleaving IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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