ENSGALG00000006676


Gallus gallus

Features
Gene ID: ENSGALG00000006676
  
Biological name :RLBP1
  
Synonyms : retinaldehyde binding protein 1 / RLBP1
  
Possible biological names infered from orthology : P12271 / Q9Z275
  
Species: Gallus gallus
  
Chr. number: 10
Strand: 1
Band:
Gene start: 12976366
Gene end: 12980554
  
Corresponding Affymetrix probe sets: Gga.12361.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000041666
Ensembl peptide - ENSGALP00000010782
NCBI entrez gene - 415492     See in Manteia.
RefSeq - NM_001024694
RefSeq Peptide - NP_001019865
swissprot - R4GHV4
swissprot - E1C1U1
Ensembl - ENSGALG00000006676
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rlbp1aENSDARG00000012504Danio rerio
 rlbp1bENSDARG00000045808Danio rerio
 RLBP1ENSG00000140522Homo sapiens
 Rlbp1ENSMUSG00000039194Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CLVS2 / clavesin 2 / Q5SYC1* / Q8BG92*ENSGALG0000001485334
TTPAL / alpha-tocopherol transfer protein-like / Q9BTX7* / Q9D3D0* / tocopherol (alpha) transfer protein-like*ENSGALG0000000424433
TTPA / alpha tocopherol transfer protein / P49638* / Q8BWP5* / tocopherol (alpha) transfer protein*ENSGALG0000003003125


Protein motifs (from Interpro)
Interpro ID Name
 IPR001251  CRAL-TRIO lipid binding domain
 IPR011074  CRAL/TRIO, N-terminal domain
 IPR032941  Retinaldehyde-binding protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007601 visual perception IEA
 molecular_functionGO:0005502 11-cis retinal binding IEA
 molecular_functionGO:0016918 retinal binding IEA


Pathways (from Reactome)
Pathway description
The retinoid cycle in cones (daylight vision)
The canonical retinoid cycle in rods (twilight vision)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000009538 RDH11* / RDH12* / Q96NR8* / Q9QYF1* / Q8BYK4* / Q8TC12* / Retinol dehydrogenase 11 * / Retinol dehydrogenase 12 * / retinol dehydrogenase 11 (all-trans/9-cis/11-cis)* / retinol dehydrogenas...  / reaction
 ENSGALG00000034346 RDH10 / retinol dehydrogenase 10 / Q8IZV5* / Q8VCH7*  / reaction






 

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