ENSDARG00000045808


Danio rerio

Features
Gene ID: ENSDARG00000045808
  
Biological name :rlbp1b
  
Synonyms : retinaldehyde binding protein 1b / rlbp1b
  
Possible biological names infered from orthology : P12271 / Q9Z275 / retinaldehyde binding protein 1 / RLBP1
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 19105804
Gene end: 19118127
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000067331
Ensembl peptide - ENSDARP00000095187
NCBI entrez gene - 402990     See in Manteia.
RefSeq - XM_005163003
RefSeq Peptide - NP_991253
swissprot - Q6P027
ZFIN ID - ZDB-GENE-040426-1870
Ensembl - ENSDARG00000045808
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RLBP1ENSGALG00000006676Gallus gallus
 RLBP1ENSG00000140522Homo sapiens
 Rlbp1ENSMUSG00000039194Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rlbp1a / retinaldehyde binding protein 1a / RLBP1* / P12271* / retinaldehyde binding protein 1*ENSDARG0000001250480
clvs2 / Q5SPP0 / clavesin 2 / CLVS1* / Q8IUQ0* / clavesin 1*ENSDARG0000005312232
ttpal / tocopherol (alpha) transfer protein-like / Q9BTX7* / Q9D3D0* / alpha tocopherol transfer protein like*ENSDARG0000007064430
ttpa / tocopherol (alpha) transfer protein / P49638* / Q8BWP5* / alpha tocopherol transfer protein*ENSDARG0000002758422


Protein motifs (from Interpro)
Interpro ID Name
 IPR001251  CRAL-TRIO lipid binding domain
 IPR011074  CRAL/TRIO, N-terminal domain
 IPR032941  Retinaldehyde-binding protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007601 visual perception IEA
 biological_processGO:0007634 optokinetic behavior IMP
 biological_processGO:0009416 response to light stimulus IMP
 molecular_functionGO:0016918 retinal binding IEA


Pathways (from Reactome)
Pathway description
The retinoid cycle in cones (daylight vision)
The canonical retinoid cycle in rods (twilight vision)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000008306 rdh5 / retinol dehydrogenase 5 (11-cis/9-cis) / Q92781* / O55240* / retinol dehydrogenase 5* / Mus musculus retinol dehydrogenase 5 (Rdh5), transcript variant 2, mRNA.*  / reaction
 ENSDARG00000012369 rdh10b / Q7T2D1 / retinol dehydrogenase 10b / RDH10* / Q8VCH7* / Q8IZV5* / retinol dehydrogenase 10*  / reaction






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr