ENSGALG00000007550


Gallus gallus

Features
Gene ID: ENSGALG00000007550
  
Biological name :TPCN2
  
Synonyms : TPCN2 / two pore segment channel 2
  
Possible biological names infered from orthology : Q8BWC0 / Q8NHX9 / Two pore calcium channel protein 2
  
Species: Gallus gallus
  
Chr. number: 5
Strand: 1
Band:
Gene start: 17116982
Gene end: 17174722
  
Corresponding Affymetrix probe sets: GgaAffx.4710.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000012194
NCBI entrez gene - 423141     See in Manteia.
RefSeq - XM_004941528
swissprot - F1NSV9
Ensembl - ENSGALG00000007550
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tpcn2ENSDARG00000100420Danio rerio
 TPCN2ENSG00000162341Homo sapiens
 Tpcn2ENSMUSG00000048677Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TPCN3 / two-pore calcium channel 3 ENSGALG0000000819821
TPCN1 / two pore segment channel 1 / Q9EQJ0* / Q9ULQ1* / Two pore calcium channel protein 1 *ENSGALG0000000835720


Protein motifs (from Interpro)
Interpro ID Name
 IPR005821  Ion transport domain
 IPR027359  Voltage-dependent channel domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006816 calcium ion transport IBA
 biological_processGO:0006874 cellular calcium ion homeostasis IEA
 biological_processGO:0006939 smooth muscle contraction IEA
 biological_processGO:0007040 lysosome organization IEA
 biological_processGO:0010506 regulation of autophagy IEA
 biological_processGO:0019722 calcium-mediated signaling IEA
 biological_processGO:0051209 release of sequestered calcium ion into cytosol IEA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0086010 membrane depolarization during action potential IBA
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005765 lysosomal membrane IEA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0010008 endosome membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005216 ion channel activity IEA
 molecular_functionGO:0005245 voltage-gated calcium channel activity IEA
 molecular_functionGO:0019901 protein kinase binding IEA
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0072345 NAADP-sensitive calcium-release channel activity IEA


Pathways (from Reactome)
Pathway description
Stimuli-sensing channels


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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