ENSGALG00000009813


Gallus gallus

Features
Gene ID: ENSGALG00000009813
  
Biological name :SCOC
  
Synonyms : SCOC / short coiled-coil protein
  
Possible biological names infered from orthology : Q78YZ6 / Q9UIL1
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 29867280
Gene end: 29870882
  
Corresponding Affymetrix probe sets: Gga.16243.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000031616
NCBI entrez gene - 422446     See in Manteia.
RefSeq - NM_001114852
RefSeq - XM_015276165
RefSeq - XM_015276166
RefSeq Peptide - NP_001108324
swissprot - B0LHV3
Ensembl - ENSGALG00000009813
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 scocaENSDARG00000087333Danio rerio
 scocbENSDARG00000002217Danio rerio
 SCOCENSG00000153130Homo sapiens
 ScocENSMUSG00000063253Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR019357  Short coiled-coil protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016239 positive regulation of macroautophagy IEA
 biological_processGO:0061635 regulation of protein complex stability IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005802 trans-Golgi network IEA


Pathways (from Reactome)
Pathway description
Retrograde transport at the Trans-Golgi-Network


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000011651 ARL1 / ADP ribosylation factor like GTPase 1 / P40616* / P61211* / ADP-ribosylation factor-like protein 1 *  / complex / reaction






 

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