ENSGALG00000013782


Gallus gallus

Features
Gene ID: ENSGALG00000013782
  
Biological name :CDH7
  
Synonyms : cadherin-7 precursor / CDH7
  
Possible biological names infered from orthology : cadherin 7 / Q8BM92 / Q9ULB5
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 95819538
Gene end: 95897002
  
Corresponding Affymetrix probe sets: Gga.15.1.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000022342
Ensembl peptide - ENSGALP00000022341
NCBI entrez gene - 374007     See in Manteia.
RefSeq - NM_204187
RefSeq Peptide - NP_989518
swissprot - F1P1D3
swissprot - F1P1D4
Ensembl - ENSGALG00000013782
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cdh7aENSDARG00000023542Danio rerio
 cdh7bENSDARG00000017649Danio rerio
 CDH7ENSG00000081138Homo sapiens
 Cdh7ENSMUSG00000026312Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CDH20 / Q8QGH3 / Cadherin-20 / Q9HBT6* / Q9Z0M3*ENSGALG0000001290662
CDH6 / Q90762 / Cadherin-6 / P55285* / P97326*ENSGALG0000001291761
CDH10 / cadherin-10 precursor / P70408* / Q9Y6N8* / cadherin 10*ENSGALG0000003202260
CDH18 / cadherin 18 / Q13634*ENSGALG0000003609760
CDH8 / cadherin-8 / P55286* / P97291*ENSGALG0000000531959
CDH9 / cadherin 9 / Q9ULB4*ENSGALG0000001292359
CDH11 / cadherin-11 precursor / P55287* / P55288* / cadherin 11*ENSGALG0000003998559
CDH12 / cadherin 12 / P55289* / Q5RJH3*ENSGALG0000001294158
CDH22 / cadherin 22 / Q9UJ99* / Q9WTP5*ENSGALG0000000721154
CDH19 / cadherin-19 precursor / Q9H159* / cadherin 19* / cadherin 19, type 2*ENSGALG0000001377553


Protein motifs (from Interpro)
Interpro ID Name
 IPR000233  Cadherin, cytoplasmic domain
 IPR002126  Cadherin
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR027397  Catenin binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001841 neural tube formation IMP
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0036032 neural crest cell delamination IMP
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
Adherens junctions interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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