Manteia

ENSDARG00000017649

Danio rerio

Features

Gene ID:	ENSDARG00000017649

Biological name :	cdh7b

Synonyms :	cadherin 7b / cdh7b

Possible biological names infered from orthology :	cadherin 7 / CDH7 / Q8BM92 / Q9ULB5

Species:	Danio rerio

Chr. number:	24
Strand:	-1
Band:
Gene start:	31493
Gene end:	39567

Corresponding Affymetrix probe sets:

Cross references:	Ensembl peptide - ENSDARP00000055487 swissprot - F1RAY1 ZFIN ID - ZDB-GENE-171002-1 Ensembl - ENSDARG00000017649

See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
cdh7a / cadherin 7a / CDH7* / Q8BM92* / Q9ULB5* / cadherin 7*	ENSDARG00000023542	54
cdh10a / cadherin 10, type 2a (T2-cadherin) / CDH6* / CDH9* / CDH10* / Q9Y6N8* / P70408* / P97326* / Q9ULB4* / P55285* / cadherin 9* / cadherin 6* / cadherin 10*	ENSDARG00000055843	45
cdh6 / cadherin 6 / CDH9* / CDH10* / Q9Y6N8* / P97326* / Q9ULB4* / P55285* / P70408* / cadherin 9* / cadherin 10*	ENSDARG00000014522	43
cdh11 / cadherin 11, type 2, OB-cadherin (osteoblast) / P55287* / P55288* / cadherin 11*	ENSDARG00000021442	43
CDH18 / cadherin 18 / Q13634*	ENSDARG00000102769	43
cdh12a / cadherin 12, type 2a (N-cadherin 2) / CDH12* / P55289* / Q5RJH3* / cadherin 12*	ENSDARG00000078226	40
CDH22 / cadherin 22 / Q9UJ99*	ENSDARG00000098824	38
cdh24b / cadherin 24, type 2b / CDH24* / Q6PFX6* / Q86UP0* / cadherin 24*	ENSDARG00000077996	37
LO017650.1 / CDH9* / CDH6* / CDH10* / Q9Y6N8* / P70408* / P97326* / Q9ULB4* / P55285* / cadherin 9* / cadherin 6* / cadherin 10*	ENSDARG00000103903	36
CABZ01109081.1 / CDH19* / Q9H159* / cadherin 19*	ENSDARG00000100598	31

Protein motifs (from Interpro)

Interpro ID	Name
IPR000233	Cadherin, cytoplasmic domain
IPR002126	Cadherin
IPR015919	Cadherin-like
IPR020894	Cadherin conserved site
IPR027397	Catenin binding domain superfamily

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0007155	cell adhesion	IEA
biological_process	GO:0007156	homophilic cell adhesion via plasma membrane adhesion molecules	IEA
cellular_component	GO:0005886	plasma membrane	IEA
cellular_component	GO:0016020	membrane	IEA
cellular_component	GO:0016021	integral component of membrane	IEA
molecular_function	GO:0005509	calcium ion binding	IEA

Pathways (from Reactome)

Pathway description

Adherens junctions interactions

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2025 contact: otassy@igbmc.fr