ENSDARG00000103903


Danio rerio

Features
Gene ID: ENSDARG00000103903
  
Biological name :LO017650.1
  
Synonyms : LO017650.1
  
Possible biological names infered from orthology : cadherin 10 / cadherin 6 / cadherin 9 / CDH10 / CDH6 / CDH9 / P55285 / P70408 / P97326 / Q9ULB4 / Q9Y6N8
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 39685485
Gene end: 39770387
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000138901
NCBI entrez gene - 100534755     See in Manteia.
swissprot - A0A0G2L2D6
Ensembl - ENSDARG00000103903
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CDH10ENSGALG00000032022Gallus gallus
 CDH6ENSGALG00000012917Gallus gallus
 CDH9ENSGALG00000012923Gallus gallus
 CDH10ENSG00000040731Homo sapiens
 CDH6ENSG00000113361Homo sapiens
 CDH9ENSG00000113100Homo sapiens
 Cdh10ENSMUSG00000022321Mus musculus
 Cdh6ENSMUSG00000039385Mus musculus
 Cdh9ENSMUSG00000025370Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cdh10a / cadherin 10, type 2a (T2-cadherin) / CDH6* / CDH9* / CDH10* / Q9Y6N8* / P70408* / P97326* / Q9ULB4* / P55285* / cadherin 9* / cadherin 6* / cadherin 10*ENSDARG0000005584367
cdh6 / cadherin 6 / CDH9* / CDH10* / Q9Y6N8* / P97326* / Q9ULB4* / P55285* / P70408* / cadherin 9* / cadherin 10*ENSDARG0000001452259
cdh7a / cadherin 7a / CDH7* / Q8BM92* / Q9ULB5* / cadherin 7*ENSDARG0000002354255
cdh12a / cadherin 12, type 2a (N-cadherin 2) / CDH12* / P55289* / Q5RJH3* / cadherin 12*ENSDARG0000007822655
CDH18 / cadherin 18 / Q13634*ENSDARG0000010276954
cdh11 / cadherin 11, type 2, OB-cadherin (osteoblast) / P55287* / P55288* / cadherin 11*ENSDARG0000002144253
CDH22 / cadherin 22 / Q9UJ99*ENSDARG0000009882446
CABZ01109081.1 / CDH19* / Q9H159* / cadherin 19*ENSDARG0000010059844
cdh24b / cadherin 24, type 2b / CDH24* / Q6PFX6* / Q86UP0* / cadherin 24*ENSDARG0000007799642
cdh7b / cadherin 7b / CDH7* / Q9ULB5* / cadherin 7*ENSDARG0000001764939


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
Adherens junctions interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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