ENSDARG00000077996


Danio rerio

Features
Gene ID: ENSDARG00000077996
  
Biological name :cdh24b
  
Synonyms : cadherin 24, type 2b / cdh24b
  
Possible biological names infered from orthology : cadherin 24 / CDH24 / Q6PFX6 / Q86UP0
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 38554260
Gene end: 38709083
  
Corresponding Affymetrix probe sets: Dr.17167.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000117205
Ensembl peptide - ENSDARP00000135839
Ensembl peptide - ENSDARP00000139499
swissprot - A0A0R4IKD8
swissprot - A0A0R4ISC0
swissprot - B8A4Q1
ZFIN ID - ZDB-GENE-081104-50
Ensembl - ENSDARG00000077996
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CDH24ENSG00000139880Homo sapiens
 Cdh24ENSMUSG00000059674Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cdh11 / cadherin 11, type 2, OB-cadherin (osteoblast) / P55287* / P55288* / cadherin 11*ENSDARG0000002144244
cdh7a / cadherin 7a / CDH7* / Q8BM92* / Q9ULB5* / cadherin 7*ENSDARG0000002354243
CDH18 / cadherin 18 / Q13634*ENSDARG0000010276943
cdh12a / cadherin 12, type 2a (N-cadherin 2) / CDH12* / P55289* / Q5RJH3* / cadherin 12*ENSDARG0000007822641
cdh6 / cadherin 6 / CDH9* / CDH10* / Q9Y6N8* / P97326* / Q9ULB4* / P55285* / P70408* / cadherin 9* / cadherin 10*ENSDARG0000001452240
cdh10a / cadherin 10, type 2a (T2-cadherin) / CDH6* / CDH9* / CDH10* / Q9Y6N8* / P70408* / P97326* / Q9ULB4* / P55285* / cadherin 9* / cadherin 6* / cadherin 10*ENSDARG0000005584340
CDH22 / cadherin 22 / Q9UJ99*ENSDARG0000009882439
LO017650.1 / CDH9* / CDH6* / CDH10* / Q9Y6N8* / P70408* / P97326* / Q9ULB4* / P55285* / cadherin 9* / cadherin 6* / cadherin 10*ENSDARG0000010390333
cdh7b / cadherin 7b / CDH7* / Q9ULB5* / cadherin 7*ENSDARG0000001764931
CABZ01109081.1 / CDH19* / Q9H159* / cadherin 19*ENSDARG0000010059829


Protein motifs (from Interpro)
Interpro ID Name
 IPR000233  Cadherin, cytoplasmic domain
 IPR002126  Cadherin
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR027397  Catenin binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
Adherens junctions interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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