ENSDARG00000102769


Danio rerio

Features
Gene ID: ENSDARG00000102769
  
Biological name :CDH18
  
Synonyms : cadherin 18 / CDH18
  
Possible biological names infered from orthology : Q13634
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 40810418
Gene end: 41114078
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000147595
Ensembl peptide - ENSDARP00000149115
Ensembl peptide - ENSDARP00000138417
Ensembl peptide - ENSDARP00000145815
Ensembl peptide - ENSDARP00000146958
NCBI entrez gene - 101886358     See in Manteia.
RefSeq - XM_021480409
RefSeq - XM_021480410
swissprot - A0A0G2L110
Ensembl - ENSDARG00000102769
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CDH18ENSGALG00000036097Gallus gallus
 CDH18ENSG00000145526Homo sapiens
 Cdh18ENSMUSG00000040420Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cdh7a / cadherin 7a / CDH7* / Q8BM92* / Q9ULB5* / cadherin 7*ENSDARG0000002354252
cdh6 / cadherin 6 / CDH9* / CDH10* / Q9Y6N8* / P97326* / Q9ULB4* / P55285* / P70408* / cadherin 9* / cadherin 10*ENSDARG0000001452251
cdh11 / cadherin 11, type 2, OB-cadherin (osteoblast) / P55287* / P55288* / cadherin 11*ENSDARG0000002144251
cdh10a / cadherin 10, type 2a (T2-cadherin) / CDH6* / CDH9* / CDH10* / Q9Y6N8* / P70408* / P97326* / Q9ULB4* / P55285* / cadherin 9* / cadherin 6* / cadherin 10*ENSDARG0000005584350
cdh12a / cadherin 12, type 2a (N-cadherin 2) / CDH12* / P55289* / Q5RJH3* / cadherin 12*ENSDARG0000007822650
CDH22 / cadherin 22 / Q9UJ99*ENSDARG0000009882446
cdh24b / cadherin 24, type 2b / CDH24* / Q6PFX6* / Q86UP0* / cadherin 24*ENSDARG0000007799642
LO017650.1 / CDH9* / CDH6* / CDH10* / Q9Y6N8* / P70408* / P97326* / Q9ULB4* / P55285* / cadherin 9* / cadherin 6* / cadherin 10*ENSDARG0000010390341
cdh7b / cadherin 7b / CDH7* / Q9ULB5* / cadherin 7*ENSDARG0000001764936
CABZ01109081.1 / CDH19* / Q9H159* / cadherin 19*ENSDARG0000010059836


Protein motifs (from Interpro)
Interpro ID Name
 IPR000233  Cadherin, cytoplasmic domain
 IPR002126  Cadherin
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR027397  Catenin binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
Adherens junctions interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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