ENSGALG00000016870


Gallus gallus

Features
Gene ID: ENSGALG00000016870
  
Biological name :TMTC4
  
Synonyms : TMTC4 / transmembrane and tetratricopeptide repeat containing 4
  
Possible biological names infered from orthology : Q5T4D3 / Q8BG19 / Transmembrane and TPR repeat-containing protein 4
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 143892182
Gene end: 143945330
  
Corresponding Affymetrix probe sets: Gga.10766.1.S1_s_at (Chicken Array)   GgaAffx.25096.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000027206
NCBI entrez gene - 418772     See in Manteia.
RefSeq - XM_015274971
RefSeq - XM_015274975
RefSeq - XM_416968
swissprot - F1P0M3
Ensembl - ENSGALG00000016870
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tmtc4ENSDARG00000020447Danio rerio
 TMTC4ENSG00000125247Homo sapiens
 Tmtc4ENSMUSG00000041594Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TMTC2 / transmembrane and tetratricopeptide repeat containing 2 / Q56A06* / Q8N394*ENSGALG0000001097534
TMTC1 / transmembrane and tetratricopeptide repeat containing 1 / Q3UV71* / Q8IUR5* / Mus musculus transmembrane and tetratricopeptide repeat containing 1 (Tmtc1), transcript variant 2, mRNA.*ENSGALG0000001295630
TMTC3* / Q6ZXV5* / transmembrane and tetratricopeptide repeat containing 3*ENSGALG0000003310622
OGT / O-linked N-acetylglucosamine (GlcNAc) transferase / O15294* / Q8CGY8* / UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit *ENSGALG0000000542517
TMTC3* / Q6ZXV5* / transmembrane and tetratricopeptide repeat containing 3*ENSGALG0000001119810


Protein motifs (from Interpro)
Interpro ID Name
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR013618  Domain of unknown function DUF1736
 IPR019734  Tetratricopeptide repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr