ENSGALG00000012956


Gallus gallus

Features
Gene ID: ENSGALG00000012956
  
Biological name :TMTC1
  
Synonyms : TMTC1 / transmembrane and tetratricopeptide repeat containing 1
  
Possible biological names infered from orthology : Mus musculus transmembrane and tetratricopeptide repeat containing 1 (Tmtc1), transcript variant 2, mRNA. / Q3UV71 / Q8IUR5
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 59777130
Gene end: 59917023
  
Corresponding Affymetrix probe sets: Gga.1615.1.S1_at (Chicken Array)   Gga.19553.1.S1_at (Chicken Array)   Gga.19553.1.S1_s_at (Chicken Array)   GgaAffx.24062.1.S1_at (Chicken Array)   GgaAffx.8199.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000021103
NCBI entrez gene - 418143     See in Manteia.
RefSeq - XM_015287026
swissprot - F1NNA8
Ensembl - ENSGALG00000012956
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tmtc1ENSDARG00000063149Danio rerio
 TMTC1ENSG00000133687Homo sapiens
 Tmtc1ENSMUSG00000030306Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TMTC2 / transmembrane and tetratricopeptide repeat containing 2 / Q56A06* / Q8N394*ENSGALG0000001097528
TMTC4 / transmembrane and tetratricopeptide repeat containing 4 / Q5T4D3* / Q8BG19* / Transmembrane and TPR repeat-containing protein 4 *ENSGALG0000001687026
TMTC3* / Q6ZXV5* / transmembrane and tetratricopeptide repeat containing 3*ENSGALG0000003310616
OGT / O-linked N-acetylglucosamine (GlcNAc) transferase / O15294* / Q8CGY8* / UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit *ENSGALG0000000542514
TMTC3* / Q6ZXV5* / transmembrane and tetratricopeptide repeat containing 3*ENSGALG000000111987


Protein motifs (from Interpro)
Interpro ID Name
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR013618  Domain of unknown function DUF1736
 IPR019734  Tetratricopeptide repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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