ENSGALG00000010975


Gallus gallus

Features
Gene ID: ENSGALG00000010975
  
Biological name :TMTC2
  
Synonyms : TMTC2 / transmembrane and tetratricopeptide repeat containing 2
  
Possible biological names infered from orthology : Q56A06 / Q8N394
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 40829223
Gene end: 41086008
  
Corresponding Affymetrix probe sets: GgaAffx.6948.1.S1_at (Chicken Array)   GgaAffx.6948.2.S1_at (Chicken Array)   GgaAffx.6948.2.S1_s_at (Chicken Array)   GgaAffx.6948.3.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000017858
Ensembl peptide - ENSGALP00000053131
Ensembl peptide - ENSGALP00000048354
Ensembl peptide - ENSGALP00000046678
Ensembl peptide - ENSGALP00000046070
NCBI entrez gene - 417880     See in Manteia.
RefSeq - XM_015283417
swissprot - A0A1D5PJY2
swissprot - A0A1D5P6M7
swissprot - A0A1D5P1Y4
swissprot - A0A1D5P096
swissprot - F1NPM4
Ensembl - ENSGALG00000010975
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tmtc2aENSDARG00000045753Danio rerio
 tmtc2bENSDARG00000035273Danio rerio
 TMTC2ENSG00000179104Homo sapiens
 Tmtc2ENSMUSG00000036019Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TMTC4 / transmembrane and tetratricopeptide repeat containing 4 / Q5T4D3* / Q8BG19* / Transmembrane and TPR repeat-containing protein 4 *ENSGALG0000001687030
TMTC1 / transmembrane and tetratricopeptide repeat containing 1 / Q3UV71* / Q8IUR5* / Mus musculus transmembrane and tetratricopeptide repeat containing 1 (Tmtc1), transcript variant 2, mRNA.*ENSGALG0000001295628
TMTC3* / Q6ZXV5* / transmembrane and tetratricopeptide repeat containing 3*ENSGALG0000003310619
OGT / O-linked N-acetylglucosamine (GlcNAc) transferase / O15294* / Q8CGY8* / UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit *ENSGALG0000000542514
TMTC3* / Q6ZXV5* / transmembrane and tetratricopeptide repeat containing 3*ENSGALG000000111987


Protein motifs (from Interpro)
Interpro ID Name
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR013618  Domain of unknown function DUF1736
 IPR019734  Tetratricopeptide repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006493 protein O-linked glycosylation IEA
 biological_processGO:0055074 calcium ion homeostasis IEA
 biological_processGO:0097502 mannosylation IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0000030 mannosyltransferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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