ENSDARG00000035273


Danio rerio

Features
Gene ID: ENSDARG00000035273
  
Biological name :tmtc2b
  
Synonyms : tmtc2b / transmembrane and tetratricopeptide repeat containing 2b
  
Possible biological names infered from orthology : Q56A06 / Q8N394 / TMTC2 / transmembrane and tetratricopeptide repeat containing 2
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 11858397
Gene end: 11909472
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000121898
swissprot - F1R794
ZFIN ID - ZDB-GENE-081031-100
Ensembl - ENSDARG00000035273
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TMTC2ENSGALG00000010975Gallus gallus
 TMTC2ENSG00000179104Homo sapiens
 Tmtc2ENSMUSG00000036019Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tmtc2a / transmembrane and tetratricopeptide repeat containing 2a / TMTC2* / Q8N394* / Q56A06* / transmembrane and tetratricopeptide repeat containing 2*ENSDARG0000004575375
tmtc1 / transmembrane and tetratricopeptide repeat containing 1 / Q3UV71* / Q8IUR5* / Mus musculus transmembrane and tetratricopeptide repeat containing 1 (Tmtc1), transcript variant 2, mRNA.*ENSDARG0000006314933
tmtc3 / transmembrane and tetratricopeptide repeat containing 3 / Q6ZXV5*ENSDARG0000006284626
tmtc4 / transmembrane and tetratricopeptide repeat containing 4 / Q5T4D3* / Q8BG19* / Transmembrane and TPR repeat-containing protein 4 *ENSDARG0000002044723
ogt.2 / ogt.1 / O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 / OGT* / O15294* / Q8CGY8* / O-linked N-acetylglucosamine (GlcNAc) transferase* / UDP-N-acetylglucosami...ENSDARG0000009945516
ogt.1 / O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 / OGT* / Q8CGY8* / O15294* / O-linked N-acetylglucosamine (GlcNAc) transferase* / UDP-N-acetylglucosamine--pept...ENSDARG0000010524316


Protein motifs (from Interpro)
Interpro ID Name
 IPR001440  Tetratricopeptide repeat 1
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR013618  Domain of unknown function DUF1736
 IPR019734  Tetratricopeptide repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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