ENSDARG00000062846


Danio rerio

Features
Gene ID: ENSDARG00000062846
  
Biological name :tmtc3
  
Synonyms : tmtc3 / transmembrane and tetratricopeptide repeat containing 3
  
Possible biological names infered from orthology : Q6ZXV5
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 18002368
Gene end: 18055064
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000127695
Ensembl peptide - ENSDARP00000128595
NCBI entrez gene - 100150181     See in Manteia.
swissprot - E7FG92
swissprot - X1WBV3
ZFIN ID - ZDB-GENE-061221-2
Ensembl - ENSDARG00000062846
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000011198Gallus gallus
 ENSGALG00000033106Gallus gallus
 TMTC3ENSG00000139324Homo sapiens
 Tmtc3ENSMUSG00000036676Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tmtc4 / transmembrane and tetratricopeptide repeat containing 4 / Q5T4D3* / Q8BG19* / Transmembrane and TPR repeat-containing protein 4 *ENSDARG0000002044727
tmtc2a / transmembrane and tetratricopeptide repeat containing 2a / TMTC2* / Q8N394* / Q56A06* / transmembrane and tetratricopeptide repeat containing 2*ENSDARG0000004575327
tmtc1 / transmembrane and tetratricopeptide repeat containing 1 / Q3UV71* / Q8IUR5* / Mus musculus transmembrane and tetratricopeptide repeat containing 1 (Tmtc1), transcript variant 2, mRNA.*ENSDARG0000006314926
tmtc2b / transmembrane and tetratricopeptide repeat containing 2b / TMTC2* / Q8N394* / Q56A06* / transmembrane and tetratricopeptide repeat containing 2*ENSDARG0000003527317
ogt.2 / ogt.1 / O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 / OGT* / O15294* / Q8CGY8* / O-linked N-acetylglucosamine (GlcNAc) transferase* / UDP-N-acetylglucosami...ENSDARG0000009945515
ogt.1 / O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 / OGT* / Q8CGY8* / O15294* / O-linked N-acetylglucosamine (GlcNAc) transferase* / UDP-N-acetylglucosamine--pept...ENSDARG0000010524315


Protein motifs (from Interpro)
Interpro ID Name
 IPR001440  Tetratricopeptide repeat 1
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR013618  Domain of unknown function DUF1736
 IPR019734  Tetratricopeptide repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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