ENSGALG00000016902


Gallus gallus

Features
Gene ID: ENSGALG00000016902
  
Biological name :GPC5
  
Synonyms : glypican 5 / GPC5
  
Possible biological names infered from orthology : P78333 / Q8CAL5
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 147664506
Gene end: 148027057
  
Corresponding Affymetrix probe sets: Gga.11967.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000027271
Ensembl peptide - ENSGALP00000056191
Ensembl peptide - ENSGALP00000055099
Ensembl peptide - ENSGALP00000047109
Ensembl peptide - ENSGALP00000046805
Ensembl peptide - ENSGALP00000045220
Ensembl peptide - ENSGALP00000044739
Ensembl peptide - ENSGALP00000044364
Ensembl peptide - ENSGALP00000044309
NCBI entrez gene - 418795     See in Manteia.
RefSeq - XM_004938584
RefSeq - XM_004938587
RefSeq - XM_004938598
RefSeq - XM_004938599
RefSeq - XM_004938602
RefSeq - XM_015274639
RefSeq - XM_015274645
RefSeq - XM_015274655
swissprot - A0A1D5PTE6
swissprot - F1P015
swissprot - A0A1D5PQD6
swissprot - A0A1D5P354
swissprot - A0A1D5P2B0
swissprot - A0A1D5NXW7
swissprot - A0A1D5NWJ9
swissprot - A0A1D5NVI9
swissprot - A0A1D5NVD5
Ensembl - ENSGALG00000016902
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gpc5aENSDARG00000103647Danio rerio
 GPC5ENSG00000179399Homo sapiens
 Gpc5ENSMUSG00000022112Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GPC3 / glypican 3 / P51654* / Q8CFZ4*ENSGALG0000000608739
ENSGALG0000000672437
GPC4 / glypican 4 / O75487* / P51655*ENSGALG0000000608023
GPC6 / glypican 6 / Q9R087* / Q9Y625*ENSGALG0000001690020
GPC1 / glypican 1 / P35052* / Q9QZF2*ENSGALG0000004031620


Protein motifs (from Interpro)
Interpro ID Name
 IPR001863  Glypican
 IPR019803  Glypican, conserved site
 IPR031188  Glypican-5


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009966 regulation of signal transduction IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031225 anchored component of membrane IEA
 cellular_componentGO:0046658 anchored component of plasma membrane IEA
 molecular_functionGO:0043395 heparan sulfate proteoglycan binding IEA


Pathways (from Reactome)
Pathway description
A tetrasaccharide linker sequence is required for GAG synthesis
HS-GAG biosynthesis
HS-GAG degradation
Release of Hh-Np from the secreting cell


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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