ENSGALG00000016905


Gallus gallus

Features
Gene ID: ENSGALG00000016905
  
Biological name :SLITRK1
  
Synonyms : SLIT and NTRK like family member 1 / SLITRK1
  
Possible biological names infered from orthology : Q810C1 / Q96PX8
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 151210535
Gene end: 151212613
  
Corresponding Affymetrix probe sets: Gga.14205.1.S1_s_at (Chicken Array)   GgaAffx.25119.1.A1_at (Chicken Array)   GgaAffx.25119.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000027275
NCBI entrez gene - 418798     See in Manteia.
RefSeq - XM_015274584
swissprot - F1NZH0
Ensembl - ENSGALG00000016905
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q96PX8ENSG00000178235Homo sapiens
 Q810C1ENSMUSG00000075478Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SLITRK2 / SLIT and NTRK like family member 2 / O96002* / Q810C0* / Q9H156*ENSGALG0000000919242
SLITRK4 / SLIT and NTRK like family member 4 / Q810B8* / Q8IW52*ENSGALG0000000724241
SLITRK5 / SLIT and NTRK like family member 5 / O94991* / Q810B7* / SLIT and NTRK-like protein 5 *ENSGALG0000002636141
SLITRK6 / SLIT and NTRK like family member 6 / Q8C110* / Q9H5Y7*ENSGALG0000001690438
SLITRK3 / SLIT and NTRK like family member 3 / O94933* / Q810B9* / Mus musculus SLIT and NTRK-like family, member 3 (Slitrk3), transcript variant 2, mRNA.*ENSGALG0000004215938
ELFN1 / extracellular leucine rich repeat and fibronectin type III domain containing 1 / P0C7U0* / Q8C8T7* / Protein ELFN1 *ENSGALG0000000420913
ELFN2 / extracellular leucine rich repeat and fibronectin type III domain containing 2 / Q5R3F8* / Q68FM6* / Mus musculus leucine rich repeat and fibronectin type III, extracellular 2 (Elfn...ENSGALG0000001244613
LRRC19 / leucine rich repeat containing 19 / Q8BZT5* / Q9H756* / Leucine-rich repeat-containing protein 19 *ENSGALG000000450289


Protein motifs (from Interpro)
Interpro ID Name
 IPR000483  Cysteine-rich flanking region, C-terminal
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0007409 axonogenesis IEA
 biological_processGO:0007416 synapse assembly IEA
 biological_processGO:0030534 adult behavior IEA
 biological_processGO:0035264 multicellular organism growth IEA
 biological_processGO:0042592 homeostatic process IEA
 biological_processGO:0050772 positive regulation of axonogenesis IEA
 biological_processGO:0051965 positive regulation of synapse assembly IEA
 cellular_componentGO:0045202 synapse IEA


Pathways (from Reactome)
Pathway description
Receptor-type tyrosine-protein phosphatases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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