ENSGALG00000042159


Gallus gallus

Features
Gene ID: ENSGALG00000042159
  
Biological name :SLITRK3
  
Synonyms : SLIT and NTRK like family member 3 / SLITRK3
  
Possible biological names infered from orthology : Mus musculus SLIT and NTRK-like family, member 3 (Slitrk3), transcript variant 2, mRNA. / O94933 / Q810B9
  
Species: Gallus gallus
  
Chr. number: 9
Strand: 1
Band:
Gene start: 21209607
Gene end: 21212267
  
Corresponding Affymetrix probe sets: Gga.15414.1.S1_s_at (Chicken Array)   GgaAffx.25251.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000053714
NCBI entrez gene - 101747514     See in Manteia.
RefSeq - XM_015291761
swissprot - A0A1D5PLJ7
Ensembl - ENSGALG00000042159
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slitrk3aENSDARG00000078123Danio rerio
 slitrk3bENSDARG00000074739Danio rerio
 O94933ENSG00000121871Homo sapiens
 Q810B9ENSMUSG00000048304Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SLITRK5 / SLIT and NTRK like family member 5 / O94991* / Q810B7* / SLIT and NTRK-like protein 5 *ENSGALG0000002636143
SLITRK2 / SLIT and NTRK like family member 2 / O96002* / Q810C0* / Q9H156*ENSGALG0000000919239
SLITRK4 / SLIT and NTRK like family member 4 / Q810B8* / Q8IW52*ENSGALG0000000724238
SLITRK6 / SLIT and NTRK like family member 6 / Q8C110* / Q9H5Y7*ENSGALG0000001690434
SLITRK1 / SLIT and NTRK like family member 1 / Q810C1* / Q96PX8*ENSGALG0000001690529
ELFN1 / extracellular leucine rich repeat and fibronectin type III domain containing 1 / P0C7U0* / Q8C8T7* / Protein ELFN1 *ENSGALG0000000420912
ELFN2 / extracellular leucine rich repeat and fibronectin type III domain containing 2 / Q5R3F8* / Q68FM6* / Mus musculus leucine rich repeat and fibronectin type III, extracellular 2 (Elfn...ENSGALG0000001244612
LRRC19 / leucine rich repeat containing 19 / Q8BZT5* / Q9H756* / Leucine-rich repeat-containing protein 19 *ENSGALG000000450288


Protein motifs (from Interpro)
Interpro ID Name
 IPR000483  Cysteine-rich flanking region, C-terminal
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007409 axonogenesis IEA
 biological_processGO:0051965 positive regulation of synapse assembly IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
Receptor-type tyrosine-protein phosphatases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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