ENSGALG00000024122


Gallus gallus

Features
Gene ID: ENSGALG00000024122
  
Biological name :TNFRSF13B
  
Synonyms : TNFRSF13B / tumor necrosis factor receptor superfamily member 13B
  
Possible biological names infered from orthology : O14836 / Q9ET35 / TNF receptor superfamily member 13B
  
Species: Gallus gallus
  
Chr. number: 14
Strand: -1
Band:
Gene start: 4680386
Gene end: 4683518
  
Corresponding Affymetrix probe sets: Gga.17782.1.A1_at (Chicken Array)   Gga.17782.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000053950
Ensembl peptide - ENSGALP00000039951
NCBI entrez gene - 770275     See in Manteia.
RefSeq - XM_015294252
RefSeq - NM_001097537
RefSeq - XM_015294250
RefSeq - XM_015294251
RefSeq Peptide - NP_001091006
swissprot - F1NMY9
swissprot - A0A1D5PM77
Ensembl - ENSGALG00000024122
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 O14836ENSG00000240505Homo sapiens
 Q9ET35ENSMUSG00000010142Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001368  TNFR/NGFR cysteine-rich region
 IPR015384  TACI, cysteine-rich domain
 IPR022317  Tumour necrosis factor receptor 13B


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001782 B cell homeostasis IBA
 biological_processGO:0002244 hematopoietic progenitor cell differentiation IBA
 biological_processGO:0007166 cell surface receptor signaling pathway IBA
 biological_processGO:0030889 negative regulation of B cell proliferation IBA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0005887 integral component of plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
TNFs bind their physiological receptors


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000016852 TNFSF13B / Q9WU72* / Q9Y275* / TNF superfamily member 13b* / tumor necrosis factor (ligand) superfamily, member 13b*  / complex / reaction
 ENSGALG00000024122 TNFRSF13B / tumor necrosis factor receptor superfamily member 13B / O14836* / Q9ET35* / TNF receptor superfamily member 13B*  / complex / reaction






 

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contact: otassy@igbmc.fr