ENSGALG00000028236


Gallus gallus

Features
Gene ID: ENSGALG00000028236
  
Biological name :PRRX2
  
Synonyms : paired related homeobox 2 / PRRX2
  
Possible biological names infered from orthology : Q99811
  
Species: Gallus gallus
  
Chr. number: 17
Strand: 1
Band:
Gene start: 6120498
Gene end: 6136674
  
Corresponding Affymetrix probe sets: Gga.12997.1.S1_s_at (Chicken Array)   Gga.1925.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000041949
NCBI entrez gene - 396314     See in Manteia.
RefSeq - NM_001293098
RefSeq - XM_015279337
RefSeq Peptide - NP_001280027
swissprot - R4GIL1
Ensembl - ENSGALG00000028236
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PRRX2ENSG00000167157Homo sapiens
 Prrx2ENSMUSG00000039476Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PRRX1 / paired mesoderm homeobox protein 1 / P54821* / P63013* / paired related homeobox 1*ENSGALG0000000332460
PITX2 / pituitary homeobox 2 / Q99697* / P97474* / paired like homeodomain 2* / paired-like homeodomain transcription factor 2*ENSGALG0000004249230
ENSGALG0000000561329
PITX1 / pituitary homeobox 1 / PITX3* / O35160* / P70314* / O75364* / P78337* / Pituitary homeobox 3 * / paired like homeodomain 1* / paired like homeodomain 3* / paired-like homeodomain t...ENSGALG0000003023728
DMBX1 / diencephalon/mesencephalon homeobox 1 / Q8NFW5* / Q91ZK4* / Diencephalon/mesencephalon homeobox protein 1 *ENSGALG0000001043625
OTX2 / orthodenticle homeobox 2 / P32243*ENSGALG0000003488924
OTX1 / orthodenticle homeobox 1 / P32242* / P80205* / Homeobox protein OTX1 *ENSGALG0000002881723
GSC / homeobox protein goosecoid / P56915* / Q02591* / goosecoid homeobox*ENSGALG0000001097419
GSC2 / goosecoid homeobox 2 / O15499*ENSGALG0000004424517


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR003654  OAR domain
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr