ENSGALG00000038152


Gallus gallus

Features
Gene ID: ENSGALG00000038152
  
Biological name :ABCC6
  
Synonyms : ABCC6
  
Possible biological names infered from orthology :
  
Species: Gallus gallus
  
Chr. number: 14
Strand: -1
Band:
Gene start: 7732655
Gene end: 7756484
  
Corresponding Affymetrix probe sets: Gga.10586.1.A1_at (Chicken Array)   Gga.10586.1.S1_at (Chicken Array)   Gga.12628.1.S1_at (Chicken Array)   GgaAffx.21378.1.S1_at (Chicken Array)   GgaAffx.22023.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000053657
NCBI entrez gene - 416600     See in Manteia.
RefSeq - XM_015294221
RefSeq - NM_001252080
RefSeq - XM_015294219
RefSeq - XM_015294220
RefSeq - XM_015294218
RefSeq Peptide - NP_001239009
swissprot - A0A1D5PLE1
Ensembl - ENSGALG00000038152
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 abcc6aENSDARG00000016750Danio rerio
 abcc6b.1ENSDARG00000105403Danio rerio
 abcc6b.2ENSDARG00000094901Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ABCC1 / multidrug resistance-associated protein 1 / O35379* / P33527* / ATP binding cassette subfamily C member 1* / ATP-binding cassette, sub-family C (CFTR/MRP), member 1*ENSGALG0000000664652
ABCC3 / ATP binding cassette subfamily C member 3 / O15438*ENSGALG0000000752247
ABCC2 / ATP binding cassette subfamily C member 2 / Q8VI47* / Q92887* / Canalicular multispecific organic anion transporter 1 *ENSGALG0000000739541
ENSGALG0000001567535
ABCC8 / ATP binding cassette subfamily C member 8 / Q09428*ENSGALG0000000617229
ABCC5 / ATP binding cassette subfamily C member 5 / O15440* / Q9R1X5* / Multidrug resistance-associated protein 5 *ENSGALG0000000836929
ABCC9 / ATP binding cassette subfamily C member 9 / O60706* / P70170* / ATP-binding cassette, sub-family C (CFTR/MRP), member 9*ENSGALG0000001324429
ABCC4 / ATP binding cassette subfamily C member 4 / O15439* / ATP-binding cassette, sub-family C (CFTR/MRP), member 4*ENSGALG0000001689629
CFTR / cystic fibrosis transmembrane conductance regulator / P13569* / P26361*ENSGALG0000003298622


Protein motifs (from Interpro)
Interpro ID Name
 IPR003439  ABC transporter-like
 IPR003593  AAA+ ATPase domain
 IPR005292  Multi drug resistance-associated protein
 IPR011527  ABC transporter type 1, transmembrane domain
 IPR017871  ABC transporter, conserved site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0022857 transmembrane transporter activity IEA
 molecular_functionGO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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