ENSDARG00000105403


Danio rerio
abcatpaseabcc6b.1domaintransportermembranebindingactivitytransporter-likeaaatypeconservedsitep-loopcontainingnucleosidetriphosphatehydrolasetransportintegralcomponentnucleotideatpcoupledmovementsubstances

Features
Gene ID: ENSDARG00000105403
  
Biological name :abcc6b.1
  
Synonyms : abcc6b.1 / ATP-binding cassette, sub-family C (CFTR/MRP), member 6b, tandem duplicate 1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 36744518
Gene end: 36764865
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000142089
Ensembl peptide - ENSDARP00000142317
Ensembl peptide - ENSDARP00000149484
swissprot - A0A140LFR5
swissprot - A0A140LGD8
ZFIN ID - ZDB-GENE-050517-19
Ensembl - ENSDARG00000105403
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ABCC6ENSGALG00000038152Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
abcc6b.2 / ATP-binding cassette, sub-family C (CFTR/MRP), member 6b, tandem duplicate 2ENSDARG0000009490193
abcc6a / ATP-binding cassette, sub-family C (CFTR/MRP), member 6aENSDARG0000001675079
abcc1 / ATP-binding cassette, sub-family C (CFTR/MRP), member 1 / O35379* / P33527* / ATP binding cassette subfamily C member 1*ENSDARG0000010471965
abcc3 / ATP-binding cassette, sub-family C (CFTR/MRP), member 3 / O15438* / ATP binding cassette subfamily C member 3*ENSDARG0000009666256
abcc2 / ATP-binding cassette, sub-family C (CFTR/MRP), member 2 / Q92887* / Q8VI47* / ATP binding cassette subfamily C member 2* / Canalicular multispecific organic anion transporter 1 *ENSDARG0000001403151
abcc4 / ATP-binding cassette, sub-family C (CFTR/MRP), member 4 / O15439* / ATP binding cassette subfamily C member 4*ENSDARG0000005895339
si:ch211-221f10.2ENSDARG0000007654738
abcc10 / ATP-binding cassette, sub-family C (CFTR/MRP), member 10ENSDARG0000007798838
abcc12 / ATP-binding cassette, sub-family C (CFTR/MRP), member 12 / Q96J66* / Q80WJ6* / Q96J65* / ABCC11* / ATP binding cassette subfamily C member 12* / ATP binding cassette subfamily C me...ENSDARG0000001305037
abcc5 / ATP-binding cassette, sub-family C (CFTR/MRP), member 5 / O15440* / Q9R1X5* / ATP binding cassette subfamily C member 5* / Multidrug resistance-associated protein 5 *ENSDARG0000006123337
abcc8 / ATP-binding cassette, sub-family C (CFTR/MRP), member 8 / Q09428* / ATP binding cassette subfamily C member 8*ENSDARG0000005187935
abcc8b / ATP-binding cassette, sub-family C (CFTR/MRP), member 8b / ABCC8* / Q09428* / ATP binding cassette subfamily C member 8*ENSDARG0000007700735
abcc9 / ATP-binding cassette, sub-family C (CFTR/MRP), member 9 / O60706* / P70170* / ATP binding cassette subfamily C member 9*ENSDARG0000001598534
cftr / Q1LX78 / cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7) / P13569* / P26361* / cystic fibrosis transmembrane conductance regulator*ENSDARG0000004110730


Protein motifs (from Interpro)
Interpro ID Name
 IPR003439  ABC transporter-like
 IPR003593  AAA+ ATPase domain
 IPR011527  ABC transporter type 1, transmembrane domain
 IPR017871  ABC transporter, conserved site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
establishment of localizationestablishment of localizationestablishment of localizationestablishment of localizationestablishment of localizationestablishment of localizationestablishment of localizationestablishment of localizationestablishment of localizationestablishment of localizationestablishment of localizationestablishment of localization
organic cyclic compound bindingheterocyclic compound bindingsmall molecule bindingion bindingcarbohydrate derivative bindingdrug bindinghydrolase activitytransmembrane transporter activityorganic cyclic compound bindingheterocyclic compound bindingsmall molecule bindingion bindingcarbohydrate derivative bindingdrug bindinghydrolase activitytransmembrane transporter activityorganic cyclic compound bindingheterocyclic compound bindingsmall molecule bindingion bindingcarbohydrate derivative bindingdrug bindinghydrolase activitytransmembrane transporter activityorganic cyclic compound bindingheterocyclic compound bindingsmall molecule bindingion bindingcarbohydrate derivative bindingdrug bindinghydrolase activitytransmembrane transporter activityorganic cyclic compound bindingheterocyclic compound bindingsmall molecule bindingion bindingcarbohydrate derivative bindingdrug bindinghydrolase activitytransmembrane transporter activityorganic cyclic compound bindingheterocyclic compound bindingsmall molecule bindingion bindingcarbohydrate derivative bindingdrug bindinghydrolase activitytransmembrane transporter activityorganic cyclic compound bindingheterocyclic compound bindingsmall molecule bindingion bindingcarbohydrate derivative bindingdrug bindinghydrolase activitytransmembrane transporter activityorganic cyclic compound bindingheterocyclic compound bindingsmall molecule bindingion bindingcarbohydrate derivative bindingdrug bindinghydrolase activitytransmembrane transporter activityorganic cyclic compound bindingheterocyclic compound bindingsmall molecule bindingion bindingcarbohydrate derivative bindingdrug bindinghydrolase activitytransmembrane transporter activityorganic cyclic compound bindingheterocyclic compound bindingsmall molecule bindingion bindingcarbohydrate derivative bindingdrug bindinghydrolase activitytransmembrane transporter activityorganic cyclic coorganic cyclic compound bindingheterocyclic compheterocyclic compound bindingsmall molecule bismall molecule bindingion bindingion bindingcarbohydrate dericarbohydrate derivative bindingdrug bindingdrug bindinghydrolase activithydrolase activitytransmembrane tratransmembrane transporter activity
membranemembranemembranemembranemembranemembranemembranemembranemembranemembranemembranemembrane
TypeGO IDTermEv.Code
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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