ENSGALG00000040484


Gallus gallus

Features
Gene ID: ENSGALG00000040484
  
Biological name :SEC31A
  
Synonyms : protein transport protein Sec31A / SEC31A
  
Possible biological names infered from orthology : O94979 / Q3UPL0 / SEC31 homolog A, COPII coat complex component
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 46643924
Gene end: 46679763
  
Corresponding Affymetrix probe sets: GgaAffx.23477.4.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000049463
Ensembl peptide - ENSGALP00000064176
NCBI entrez gene - 422597     See in Manteia.
RefSeq - XM_015276265
RefSeq - XM_015276262
RefSeq - XM_015276263
RefSeq - XM_015276264
RefSeq - NM_001031141
RefSeq - XM_015276249
RefSeq - XM_015276250
RefSeq - XM_015276251
RefSeq - XM_015276252
RefSeq - XM_015276253
RefSeq - XM_015276254
RefSeq - XM_015276255
RefSeq - XM_015276257
RefSeq - XM_015276258
RefSeq - XM_015276259
RefSeq - XM_015276260
RefSeq - XM_015276261
RefSeq Peptide - NP_001026312
swissprot - A0A1L1RZ85
swissprot - A0A1D5P9Q7
Ensembl - ENSGALG00000040484
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sec31aENSDARG00000021082Danio rerio
 O94979ENSG00000138674Homo sapiens
 Q3UPL0ENSMUSG00000035325Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SEC31B / SEC31 homolog B, COPII coat complex component / Q3TZ89* / Q9NQW1* / Protein transport protein Sec31B *ENSGALG0000000572234


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0051592 response to calcium ion IEA
 biological_processGO:0090110 cargo loading into COPII-coated vesicle IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0030120 vesicle coat IEA
 cellular_componentGO:0030127 COPII vesicle coat IEA
 cellular_componentGO:0030134 COPII-coated ER to Golgi transport vesicle IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 cellular_componentGO:0070971 endoplasmic reticulum exit site IEA
 molecular_functionGO:0048306 calcium-dependent protein binding IEA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport
Antigen Presentation: Folding, assembly and peptide loading of class I MHC


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000008419 SEC13 / P55735* / Q9D1M0* / SEC13 homolog, nuclear pore and COPII coat complex component*  / complex / reaction
 ENSGALG00000006417 SEC24A / Gallus gallus SEC24 homolog A, COPII coat complex component (SEC24A), mRNA. / O95486* / Q3U2P1* / Protein transport protein Sec24A * / SEC24 homolog A, COPII coat complex component*  / complex / reaction
 ENSGALG00000010150 SEC23A / Sec23 homolog A, coat complex II component / Q01405* / Q15436* / Protein transport protein Sec23A *  / complex / reaction
 ENSGALG00000011998 SEC24D / SEC24 homolog D, COPII coat complex component / O94855* / Sec24 related gene family, member D (S. cerevisiae)*  / complex / reaction
 ENSGALG00000002160 B2M / P21611 / Beta-2-microglobulin / P01887* / P61769*  / complex / reaction
 ENSGALG00000038753 SAR1B / GTP-binding protein SAR1b / Q9CQC9* / Q9Y6B6* / secretion associated Ras related GTPase 1B*  / complex / reaction
 ENSGALG00000002364 SEC16A / SEC16 homolog A, endoplasmic reticulum export factor / O15027*  / complex / reaction
 ENSGALG00000004424 SEC16B / protein transport protein Sec16B / Q91XT4* / Q96JE7* / SEC16 homolog B, endoplasmic reticulum export factor*  / complex / reaction
 ENSGALG00000004594 CD74 / CD74 molecule / P04233* / P04441* / CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)*  / complex
 ENSGALG00000015299 TFG / TRK-fused gene / Q92734*  / complex / reaction
 ENSGALG00000040484 SEC31A / protein transport protein Sec31A / O94979* / Q3UPL0* / SEC31 homolog A, COPII coat complex component*  / complex
 ENSGALG00000031582 RAB1B / RAB1A, member RAS oncogene family / Rab1* / RAB1A* / P62821* / P62820* / Ras-related protein Rab-1A *  / complex / reaction
 ENSGALG00000039704 Q5ZJW4 / SEC22B / Vesicle-trafficking protein SEC22b / O08547* / O75396* / SEC22 homolog B, vesicle trafficking protein (gene/pseudogene)*  / complex / reaction






 

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