ENSMUSG00000018752


Mus musculus

Features
Gene ID: ENSMUSG00000018752
  
Biological name :Tnfsfm13
  
Synonyms : Tnfsfm13 / tumor necrosis factor (ligand) superfamily, membrane-bound member 13
  
Possible biological names infered from orthology : TNFSF12-TNFSF13 / TNFSF12-TNFSF13 readthrough
  
Species: Mus musculus
  
Chr. number: 11
Strand: -1
Band: B3
Gene start: 69682577
Gene end: 69696098
  
Corresponding Affymetrix probe sets: 10387568 (MoGene1.0st)   1418345_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000104289
Ensembl peptide - ENSMUSP00000133951
Ensembl peptide - ENSMUSP00000137973
NCBI entrez gene - 619441     See in Manteia.
MGI - MGI:3845075
RefSeq - NM_001034097
RefSeq - NM_001159503
RefSeq Peptide - NP_001029269
RefSeq Peptide - NP_001152975
swissprot - Q8BXS2
swissprot - Q5F2A1
swissprot - B0QZJ0
Ensembl - ENSMUSG00000018752
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tnfsf13ENSDARG00000091556Danio rerio
 TNFSF12-TNFSF13ENSG00000248871Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
O54907 / Tnfsf12 / Tumor necrosis factor ligand superfamily member 12 Tumor necrosis factor ligand superfamily member 12, membrane form Tumor necrosis factor ligand superfamily member 12, se...ENSMUSG0000009732845
Tnfsf13 / tumor necrosis factor (ligand) superfamily, member 13 / O75888* / TNF superfamily member 13*ENSMUSG0000008966934
Q9WU72 / Tnfsf13b / tumor necrosis factor (ligand) superfamily, member 13b / Q9Y275* / TNF superfamily member 13b*ENSMUSG0000003149716


Protein motifs (from Interpro)
Interpro ID Name
 IPR006052  Tumour necrosis factor domain
 IPR008983  Tumour necrosis factor-like domain superfamily
 IPR021184  Tumour necrosis factor, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006955 immune response IEA
 biological_processGO:0008150 biological_process ND
 biological_processGO:0010469 regulation of signaling receptor activity IEA
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005125 cytokine activity IEA
 molecular_functionGO:0005164 tumor necrosis factor receptor binding IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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