ENSMUSG00000032289


Mus musculus

Features
Gene ID: ENSMUSG00000032289
  
Biological name :Thsd4
  
Synonyms : Q3UTY6 / Thrombospondin type-1 domain-containing protein 4 / Thsd4
  
Possible biological names infered from orthology : Q6ZMP0 / thrombospondin type 1 domain containing 4
  
Species: Mus musculus
  
Chr. number: 9
Strand: -1
Band: B
Gene start: 59966931
Gene end: 60522046
  
Corresponding Affymetrix probe sets: 10594199 (MoGene1.0st)   1442552_at (Mouse Genome 430 2.0 Array)   1455262_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000034829
Ensembl peptide - ENSMUSP00000096257
Ensembl peptide - ENSMUSP00000123323
Ensembl peptide - ENSMUSP00000131418
NCBI entrez gene - 207596     See in Manteia.
MGI - MGI:2672033
RefSeq - XM_006510907
RefSeq - NM_001040426
RefSeq - NM_172444
RefSeq - XM_006510905
RefSeq - XM_006510906
RefSeq Peptide - NP_001035516
RefSeq Peptide - NP_766032
swissprot - Q3UTY6
swissprot - D3Z044
Ensembl - ENSMUSG00000032289
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 adamtsl7ENSDARG00000055439Danio rerio
 THSD4ENSGALG00000004087Gallus gallus
 THSD4ENSG00000187720Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q80T21 / Adamtsl4 / ADAMTS-like protein 4 / Q6UY14* / ADAMTS like 4*ENSMUSG0000001585037
Papln / Q9EPX2 / Papilin / O95428* / papilin, proteoglycan like sulfated glycoprotein*ENSMUSG0000002122324
P59511 / Adamts20 / A disintegrin and metalloproteinase with thrombospondin motifs 20 / P59510* / ADAM metallopeptidase with thrombospondin type 1 motif 20*ENSMUSG0000002244924
Q7TSK7 / Adamtsl2 / ADAMTS-like protein 2 / Q86TH1* / ADAMTS like 2*ENSMUSG0000003604024
Adamts9 / a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 9 / Q9P2N4* / ADAM metallopeptidase with thrombospondin type 1 motif 9*ENSMUSG0000003002223
Q8BLI0 / Adamtsl1 / ADAMTS-like protein 1 / Q8N6G6* / ADAMTS like 1*ENSMUSG0000006611321
Adamtsl3 / ADAMTS-like 3 / P82987*ENSMUSG0000007046921
Q769J6 / Adamts13 / A disintegrin and metalloproteinase with thrombospondin motifs 13 / Q76LX8* / ADAM metallopeptidase with thrombospondin type 1 motif 13*ENSMUSG0000001485218
P97857 / Adamts1 / A disintegrin and metalloproteinase with thrombospondin motifs 1 / Q9UHI8* / ADAM metallopeptidase with thrombospondin type 1 motif 1*ENSMUSG0000002289315
P59384 / Adamts15 / A disintegrin and metalloproteinase with thrombospondin motifs 15 / Q8TE58* / ADAM metallopeptidase with thrombospondin type 1 motif 15*ENSMUSG0000003345315
Adamts8 / A disintegrin and metalloproteinase with thrombospondin motifs 8 isoform 2 / Q9UP79* / ADAM metallopeptidase with thrombospondin type 1 motif 8*ENSMUSG0000003199413
Q9R001 / Adamts5 / A disintegrin and metalloproteinase with thrombospondin motifs 5 / Q9UNA0* / ADAM metallopeptidase with thrombospondin type 1 motif 5*ENSMUSG0000002289412
Q8BNJ2 / Adamts4 / A disintegrin and metalloproteinase with thrombospondin motifs 4 / O75173* / ADAM metallopeptidase with thrombospondin type 1 motif 4*ENSMUSG0000000640311


Protein motifs (from Interpro)
Interpro ID Name
 IPR000884  Thrombospondin type-1 (TSP1) repeat
 IPR010294  ADAM-TS Spacer 1
 IPR010909  PLAC
 IPR036383  Thrombospondin type-1 (TSP1) repeat superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0048251 elastic fiber assembly IDA
 cellular_componentGO:0001527 microfibril IDA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0031012 extracellular matrix ISO
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
O-glycosylation of TSR domain-containing proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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