ENSMUSG00000054752


Mus musculus

Features
Gene ID: ENSMUSG00000054752
  
Biological name :Fsd1l
  
Synonyms : Fsd1l / Mus musculus fibronectin type III and SPRY domain containing 1-like (Fsd1l), transcript variant 3, mRNA. / Q8BYN5
  
Possible biological names infered from orthology : fibronectin type III and SPRY domain containing 1 like / Q9BXM9
  
Species: Mus musculus
  
Chr. number: 4
Strand: 1
Band: B2
Gene start: 53631471
Gene end: 53707009
  
Corresponding Affymetrix probe sets: 10505030 (MoGene1.0st)   
  
Cross references: Ensembl peptide - ENSMUSP00000114931
Ensembl peptide - ENSMUSP00000124002
Ensembl peptide - ENSMUSP00000124613
Ensembl peptide - ENSMUSP00000136184
Ensembl peptide - ENSMUSP00000121176
NCBI entrez gene - 319636     See in Manteia.
MGI - MGI:2442443
RefSeq - XM_006537982
RefSeq - NM_001195284
RefSeq - NM_001355377
RefSeq - XM_006537980
RefSeq - XM_006537981
RefSeq Peptide - NP_001182213
RefSeq Peptide - NP_001342306
swissprot - J3QM95
swissprot - E9PV06
swissprot - Q8BYN5
swissprot - F8WGT4
swissprot - E0CXZ1
Ensembl - ENSMUSG00000054752
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 fsd1lENSDARG00000059432Danio rerio
 FSD1LENSGALG00000015442Gallus gallus
 FSD1LENSG00000106701Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Fsd1 / Q7TPM6 / Fibronectin type III and SPRY domain-containing protein 1 / Q9BTV5* / fibronectin type III and SPRY domain containing 1*ENSMUSG0000001158958
Mid2 / Mus musculus midline 2 (Mid2), transcript variant 2, mRNA. / Q9UJV3* / midline 2*ENSMUSG0000000026625
Mid1 / O70583 / E3 ubiquitin-protein ligase Midline-1 / O15344* / midline 1*ENSMUSG0000003529925
Q7TNM2 / Trim46 / tripartite motif-containing 46 / Q7Z4K8*ENSMUSG0000004276622
Q505D9 / Trim67 / Tripartite motif-containing protein 67 / Q6ZTA4* / tripartite motif containing 67*ENSMUSG0000003691321
Trim9 / Q8C7M3 / E3 ubiquitin-protein ligase TRIM9 / Q9C026* / tripartite motif containing 9*ENSMUSG0000002107120
Q80WG7 / Trim36 / E3 ubiquitin-protein ligase Trim36 / Q9NQ86* / tripartite motif containing 36*ENSMUSG0000003394920
Trim55 / tripartite motif-containing 55 / Q9BYV6*ENSMUSG0000006091312
Trim63 / tripartite motif-containing 63 / Q969Q1*ENSMUSG0000002883411
Q9ERP3 / Trim54 / Tripartite motif-containing protein 54 / Q9BYV2* / tripartite motif containing 54*ENSMUSG000000620778


Protein motifs (from Interpro)
Interpro ID Name
 IPR001870  B30.2/SPRY domain
 IPR003649  B-box, C-terminal
 IPR003877  SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR003961  Fibronectin type III
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR013783  Immunoglobulin-like fold
 IPR017903  COS domain
 IPR035742  Fibronectin type III and SPRY containing 1, PRY/SPRY domain
 IPR036116  Fibronectin type III superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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