ENSMUSG00000060904


Mus musculus

Features
Gene ID: ENSMUSG00000060904
  
Biological name :Arl1
  
Synonyms : ADP-ribosylation factor-like protein 1 / Arl1 / P61211
  
Possible biological names infered from orthology : ADP ribosylation factor like GTPase 1 / P40616
  
Species: Mus musculus
  
Chr. number: 10
Strand: 1
Band: C1
Gene start: 88730858
Gene end: 88744094
  
Corresponding Affymetrix probe sets: 10365637 (MoGene1.0st)   1447089_at (Mouse Genome 430 2.0 Array)   1447090_s_at (Mouse Genome 430 2.0 Array)   1451025_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000127889
Ensembl peptide - ENSMUSP00000079246
Ensembl peptide - ENSMUSP00000111942
NCBI entrez gene - 104303     See in Manteia.
MGI - MGI:99436
RefSeq - NM_025859
RefSeq Peptide - NP_080135
swissprot - Q14AC7
swissprot - E9Q006
swissprot - F8WIB1
swissprot - P61211
Ensembl - ENSMUSG00000060904
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 arl1ENSDARG00000101680Danio rerio
 ARL1ENSGALG00000011651Gallus gallus
 ARL1ENSG00000120805Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Arl5b / ADP ribosylation factor like GTPase 5B / Q96KC2*ENSMUSG0000001741849
Arl5a / Q80ZU0 / ADP-ribosylation factor-like protein 5A / Q9Y689* / ADP ribosylation factor like GTPase 5A*ENSMUSG0000003609349
Arl5c / Q6P068 / ADP-ribosylation factor-like protein 5C / A6NH57* / ADP ribosylation factor like GTPase 5C*ENSMUSG0000003835242
Arl6 / O88848 / ADP-ribosylation factor-like protein 6 / Q9H0F7* / ADP ribosylation factor like GTPase 6*ENSMUSG0000002272237


Protein motifs (from Interpro)
Interpro ID Name
 IPR005225  Small GTP-binding protein domain
 IPR006689  Small GTPase superfamily, ARF/SAR type
 IPR024156  Small GTPase superfamily, ARF type
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007030 Golgi organization IEA
 biological_processGO:0009404 toxin metabolic process IEA
 biological_processGO:0031584 activation of phospholipase D activity IEA
 biological_processGO:0034067 protein localization to Golgi apparatus IEA
 biological_processGO:0042147 retrograde transport, endosome to Golgi IEA
 biological_processGO:0048193 Golgi vesicle transport IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0005794 Golgi apparatus ISO
 cellular_componentGO:0005802 trans-Golgi network IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA
 molecular_functionGO:0008047 enzyme activator activity IEA
 molecular_functionGO:0019904 protein domain specific binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Retrograde transport at the Trans-Golgi-Network


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000030881 Arfip2 / Q8K221 / Arfaptin-2 / P53365* / ADP ribosylation factor interacting protein 2*  / complex / reaction
 ENSMUSG00000038671 Arfrp1 / Q8BXL7 / ADP-ribosylation factor-related protein 1 / Q13795*  / complex
 ENSMUSG00000063253 Scoc / Q78YZ6 / Short coiled-coil protein / Q9UIL1*  / complex / reaction






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr