ENSMUSG00000109372


Mus musculus

Features
Gene ID: ENSMUSG00000109372
  
Biological name :Gm19410
  
Synonyms : Gm19410
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 8
Strand: 1
Band: A4
Gene start: 35765790
Gene end: 35818047
  
Corresponding Affymetrix probe sets: 10571329 (MoGene1.0st)   
  
Cross references: Ensembl peptide - ENSMUSP00000147162
NCBI entrez gene - 100502846     See in Manteia.
MGI - MGI:5011595
RefSeq - XM_006509234
RefSeq - XM_006509235
RefSeq - XM_006509236
swissprot - A0A140LJC7
Ensembl - ENSMUSG00000109372
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lrp13ENSDARG00000023479Danio rerio
 lrp1baENSDARG00000094171Danio rerio
 si:dkey-88l16.3ENSDARG00000094055Danio rerio
 ENSGALG00000023172Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Lrp2 / A2ARV4 / low density lipoprotein receptor-related protein 2 / P98164* / LDL receptor related protein 2*ENSMUSG0000002707029
Lrp1 / LDL receptor related protein 1 / Q07954*ENSMUSG0000004024927
Lrp1b / LDL receptor related protein 1B / Q9NZR2*ENSMUSG0000004925226
Lrp4 / Q8VI56 / Low-density lipoprotein receptor-related protein 4 / O75096* / LDL receptor related protein 4*ENSMUSG0000002725316
Vldlr / P98156 / very low density lipoprotein receptor / P98155*ENSMUSG0000002492412
Ldlr / P35951 / Low-density lipoprotein receptor / P01130*ENSMUSG0000003219312
Lrp5 / Q91VN0 / Low-density lipoprotein receptor-related protein 5 / O75197* / LDL receptor related protein 5*ENSMUSG0000002491311
Lrp8 / Q924X6 / Low-density lipoprotein receptor-related protein 8 / Q14114* / LDL receptor related protein 8*ENSMUSG0000002861310
Lrp6 / LDL receptor related protein 6 / O75581*ENSMUSG0000003020110


Protein motifs (from Interpro)
Interpro ID Name
 IPR000033  LDLR class B repeat
 IPR000152  EGF-type aspartate/asparagine hydroxylation site
 IPR000742  EGF-like domain
 IPR001881  EGF-like calcium-binding domain
 IPR002172  Low-density lipoprotein (LDL) receptor class A repeat
 IPR009030  Growth factor receptor cysteine-rich domain superfamily
 IPR011042  Six-bladed beta-propeller, TolB-like
 IPR013032  EGF-like, conserved site
 IPR018097  EGF-like calcium-binding, conserved site
 IPR023415  Low-density lipoprotein (LDL) receptor class A, conserved site
 IPR036055  LDL receptor-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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