ENSGALG00000023172


Gallus gallus

Features
Gene ID: ENSGALG00000023172
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : Gm19410
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 49891852
Gene end: 49901330
  
Corresponding Affymetrix probe sets: GgaAffx.8735.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000037133
swissprot - F1NCJ5
Ensembl - ENSGALG00000023172
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lrp13ENSDARG00000023479Danio rerio
 lrp1baENSDARG00000094171Danio rerio
 si:dkey-88l16.3ENSDARG00000094055Danio rerio
 Gm19410ENSMUSG00000109372Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LRP2 / LDL receptor related protein 2 / A2ARV4* / P98164* / low density lipoprotein receptor-related protein 2*ENSGALG0000001085826
LRP1B / LDL receptor related protein 1B / Q9NZR2*ENSGALG0000001240723
LRP4 / LDL receptor related protein 4 / O75096* / Q8VI56* / Low-density lipoprotein receptor-related protein 4 *ENSGALG0000003218114
VLDLR / P98165 / Very low-density lipoprotein receptor / P98155* / P98156*ENSGALG0000001016613
LRP8 / low-density lipoprotein receptor-related protein 8 precursor / Q14114* / Q924X6* / LDL receptor related protein 8* / Low-density lipoprotein receptor-related protein 8 *ENSGALG0000001069213
LRP5 / low-density lipoprotein receptor-related protein 5 precursor / O75197* / Q91VN0* / LDL receptor related protein 5* / Low-density lipoprotein receptor-related protein 5 *ENSGALG000000295336
LRP6 / LDL receptor related protein 6 / O75581*ENSGALG000000315036


Protein motifs (from Interpro)
Interpro ID Name
 IPR000033  LDLR class B repeat
 IPR000152  EGF-type aspartate/asparagine hydroxylation site
 IPR000742  EGF-like domain
 IPR001881  EGF-like calcium-binding domain
 IPR002172  Low-density lipoprotein (LDL) receptor class A repeat
 IPR011042  Six-bladed beta-propeller, TolB-like
 IPR013032  EGF-like, conserved site
 IPR018097  EGF-like calcium-binding, conserved site
 IPR023415  Low-density lipoprotein (LDL) receptor class A, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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