ENSDARG00000000551


Danio rerio

Features
Gene ID: ENSDARG00000000551
  
Biological name :slc1a4
  
Synonyms : slc1a4 / solute carrier family 1 (glutamate/neutral amino acid transporter), member 4
  
Possible biological names infered from orthology : O35874 / P43007 / solute carrier family 1 member 4
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 24429918
Gene end: 24448278
  
Corresponding Affymetrix probe sets: Dr.25217.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000057583
Ensembl peptide - ENSDARP00000043003
NCBI entrez gene - 368885     See in Manteia.
RefSeq - NM_001002513
RefSeq Peptide - NP_001002513
swissprot - D7RVS1
swissprot - Q7ZZ28
ZFIN ID - ZDB-GENE-030616-566
Ensembl - ENSDARG00000000551
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC1A4ENSGALG00000008811Gallus gallus
 P43007ENSG00000115902Homo sapiens
 O35874ENSMUSG00000020142Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc1a5 / solute carrier family 1 (neutral amino acid transporter), member 5 / Q15758* / solute carrier family 1 member 5*ENSDARG0000009918660
slc1a6 / solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6 / O35544* / P48664* / solute carrier family 1 member 6*ENSDARG0000001009643
slc1a3b / solute carrier family 1 (glial high affinity glutamate transporter), member 3b / P56564* / SLC1A3* / P43003* / solute carrier family 1 member 3* / solute carrier family 1 (glial h...ENSDARG0000004314842
slc1a3a / solute carrier family 1 (glial high affinity glutamate transporter), member 3a / P43003* / SLC1A3* / solute carrier family 1 member 3*ENSDARG0000010443142
slc1a1 / solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 / P43005* / P51906* / solute carrier family 1 member 1*ENSDARG0000002021241
slc1a2b / solute carrier family 1 (glial high affinity glutamate transporter), member 2b / P43006* / SLC1A2* / P43004* / solute carrier family 1 member 2* / solute carrier family 1 (glial h...ENSDARG0000010245340
slc1a2a / solute carrier family 1 (glial high affinity glutamate transporter), member 2a / P43006* / SLC1A2* / P43004* / solute carrier family 1 member 2* / solute carrier family 1 (glial h...ENSDARG0000005213839
slc1a7b / solute carrier family 1 (glutamate transporter), member 7b / SLC1A7* / O00341* / solute carrier family 1 member 7* / solute carrier family 1 (glutamate transporter), member 7*ENSDARG0000002624839
slc1a8b / solute carrier family 1 (glutamate transporter), member 8bENSDARG0000003246538
slc1a7a / solute carrier family 1 (glutamate transporter), member 7a / SLC1A7* / O00341* / solute carrier family 1 member 7* / solute carrier family 1 (glutamate transporter), member 7*ENSDARG0000003494038
slc1a8a / solute carrier family 1 (glutamate transporter), member 8aENSDARG0000010420437


Protein motifs (from Interpro)
Interpro ID Name
 IPR001991  Sodium:dicarboxylate symporter
 IPR018107  Sodium:dicarboxylate symporter, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0015293 symporter activity IEA


Pathways (from Reactome)
Pathway description
Amino acid transport across the plasma membrane


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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