ENSDARG00000010096


Danio rerio

Features
Gene ID: ENSDARG00000010096
  
Biological name :slc1a6
  
Synonyms : slc1a6 / solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6
  
Possible biological names infered from orthology : O35544 / P48664 / solute carrier family 1 member 6
  
Species: Danio rerio
  
Chr. number: 11
Strand: 1
Band:
Gene start: 6152643
Gene end: 6175057
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000017590
Ensembl peptide - ENSDARP00000143703
NCBI entrez gene - 559270     See in Manteia.
RefSeq - NM_001109703
RefSeq Peptide - NP_001103173
swissprot - D7RVS3
swissprot - A0A286Y964
ZFIN ID - ZDB-GENE-071004-45
Ensembl - ENSDARG00000010096
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC1A6ENSGALG00000000558Gallus gallus
 P48664ENSG00000105143Homo sapiens
 O35544ENSMUSG00000005357Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc1a3a / solute carrier family 1 (glial high affinity glutamate transporter), member 3a / P43003* / SLC1A3* / solute carrier family 1 member 3*ENSDARG0000010443169
slc1a3b / solute carrier family 1 (glial high affinity glutamate transporter), member 3b / P56564* / SLC1A3* / P43003* / solute carrier family 1 member 3* / solute carrier family 1 (glial h...ENSDARG0000004314868
slc1a1 / solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 / P43005* / P51906* / solute carrier family 1 member 1*ENSDARG0000002021250
slc1a7a / solute carrier family 1 (glutamate transporter), member 7a / SLC1A7* / O00341* / solute carrier family 1 member 7* / solute carrier family 1 (glutamate transporter), member 7*ENSDARG0000003494048
slc1a7b / solute carrier family 1 (glutamate transporter), member 7b / SLC1A7* / O00341* / solute carrier family 1 member 7* / solute carrier family 1 (glutamate transporter), member 7*ENSDARG0000002624848
slc1a8b / solute carrier family 1 (glutamate transporter), member 8bENSDARG0000003246546
slc1a8a / solute carrier family 1 (glutamate transporter), member 8aENSDARG0000010420446
slc1a2b / solute carrier family 1 (glial high affinity glutamate transporter), member 2b / P43006* / SLC1A2* / P43004* / solute carrier family 1 member 2* / solute carrier family 1 (glial h...ENSDARG0000010245345
slc1a2a / solute carrier family 1 (glial high affinity glutamate transporter), member 2a / P43006* / SLC1A2* / P43004* / solute carrier family 1 member 2* / solute carrier family 1 (glial h...ENSDARG0000005213844
slc1a5 / solute carrier family 1 (neutral amino acid transporter), member 5 / Q15758* / solute carrier family 1 member 5*ENSDARG0000009918643
slc1a4 / solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 / O35874* / P43007* / solute carrier family 1 member 4*ENSDARG0000000055140


Protein motifs (from Interpro)
Interpro ID Name
 IPR001991  Sodium:dicarboxylate symporter
 IPR018107  Sodium:dicarboxylate symporter, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0015293 symporter activity IEA


Pathways (from Reactome)
Pathway description
Glutamate Neurotransmitter Release Cycle
Transport of inorganic cations/anions and amino acids/oligopeptides


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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