ENSDARG00000001162


Danio rerio

Features
Gene ID: ENSDARG00000001162
  
Biological name :matr3l1.1
  
Synonyms : matr3l1.1 / matrin 3-like 1.1
  
Possible biological names infered from orthology : Q3UQS8 / Q5T481 / RBM20 / RNA binding motif protein 20 / RNA-binding protein 20
  
Species: Danio rerio
  
Chr. number: 14
Strand: -1
Band:
Gene start: 25063318
Gene end: 25078580
  
Corresponding Affymetrix probe sets: Dr.11658.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000112927
Ensembl peptide - ENSDARP00000142257
Ensembl peptide - ENSDARP00000142480
NCBI entrez gene - 556124     See in Manteia.
RefSeq - NM_001007136
RefSeq Peptide - NP_001007137
swissprot - Q800H4
ZFIN ID - ZDB-GENE-030616-40
Ensembl - ENSDARG00000001162
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RBM20ENSGALG00000008697Gallus gallus
 RBM20ENSG00000203867Homo sapiens
 Rbm20ENSMUSG00000043639Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
matr3l1.1 / matrin 3-like 1.1 / MATR3* / Q8K310* / P43243* / Gm28285* / matrin 3*ENSDARG000000003949
si:ch211-271b14.1ENSDARG000001018087


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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