ENSDARG00000001431


Danio rerio

Features
Gene ID: ENSDARG00000001431
  
Biological name :actn3b
  
Synonyms : actinin alpha 3b / actn3b
  
Possible biological names infered from orthology : actinin alpha 3 (gene/pseudogene) / ACTN3 / Alpha-actinin-3 / O88990 / Q08043
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 6969909
Gene end: 7133475
  
Corresponding Affymetrix probe sets: Dr.5066.1.S1_at (Zebrafish Array)   NM_205544_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000000803
Ensembl peptide - ENSDARP00000145426
NCBI entrez gene - 323320     See in Manteia.
RefSeq - NM_205544
RefSeq Peptide - NP_991107
swissprot - Q8AX99
ZFIN ID - ZDB-GENE-030131-2040
Ensembl - ENSDARG00000001431
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ACTN3ENSG00000248746Homo sapiens
 Actn3ENSMUSG00000006457Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
actn3a / actinin alpha 3a / ACTN3* / Q08043* / O88990* / Alpha-actinin-3 * / actinin alpha 3 (gene/pseudogene)*ENSDARG0000001375593
actn2b / actinin, alpha 2b / ACTN2* / P35609* / Q9JI91* / actinin alpha 2* / Alpha-actinin-2 *ENSDARG0000007109082
actn1 / actinin, alpha 1 / P12814* / Q7TPR4* / Mus musculus actinin, alpha 1 (Actn1), transcript variant 2, mRNA.*ENSDARG0000000721979
actn4 / actinin, alpha 4 / O43707*ENSDARG0000009978679
sptbn5 / spectrin, beta, non-erythrocytic 5 / Q9NRC6*ENSDARG0000009768330
sptbn2 / spectrin, beta, non-erythrocytic 2 / O15020*ENSDARG0000005395629
sptb / spectrin, beta, erythrocytic / P11277*ENSDARG0000003049028
sptbn1 / spectrin, beta, non-erythrocytic 1 / Q01082* / Q62261* / Spectrin beta chain, non-erythrocytic 1 *ENSDARG0000010288327
SPTBN4 / si:ch73-262h23.4 / Q9H254* / spectrin beta, non-erythrocytic 4*ENSDARG0000009262423
sptan1 / spectrin alpha, non-erythrocytic 1 / SPTA1* / Q13813* / P08032* / P16546* / P02549* / spectrin alpha, erythrocytic 1* / Spectrin alpha chain, erythrocytic 1 * / Spectrin alpha chai...ENSDARG0000001923118
si:dkey-27p18.5 / Q9H254* / SPTBN4* / spectrin beta, non-erythrocytic 4*ENSDARG000000686244
si:zfos-1837d3.1 / Q62261* / Q01082* / SPTBN1* / spectrin beta, non-erythrocytic 1* / Spectrin beta chain, non-erythrocytic 1 *ENSDARG000001054281
si:ch73-262h23.4 / Q9H254* / SPTBN4* / spectrin beta, non-erythrocytic 4*ENSDARG000001119421


Protein motifs (from Interpro)
Interpro ID Name
 IPR001589  Actinin-type actin-binding domain, conserved site
 IPR001715  Calponin homology domain
 IPR002017  Spectrin repeat
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR014837  EF-hand, Ca insensitive
 IPR018159  Spectrin/alpha-actinin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
Striated Muscle Contraction


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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