ENSDARG00000002255


Danio rerio

Features
Gene ID: ENSDARG00000002255
  
Biological name :epb41l3a
  
Synonyms : epb41l3a / erythrocyte membrane protein band 4.1-like 3a
  
Possible biological names infered from orthology : Band 4.1-like protein 3 Band 4.1-like protein 3, N-terminally processed / EPB41L3 / erythrocyte membrane protein band 4.1 like 3 / Q9WV92 / Q9Y2J2
  
Species: Danio rerio
  
Chr. number: 24
Strand: 1
Band:
Gene start: 41931585
Gene end: 41986895
  
Corresponding Affymetrix probe sets: Dr.14860.1.A1_at (Zebrafish Array)   NM_001003987_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000016443
Ensembl peptide - ENSDARP00000111490
NCBI entrez gene - 445478     See in Manteia.
RefSeq - XM_021470154
RefSeq - NM_001003987
RefSeq Peptide - NP_001003987
swissprot - Q68EI5
ZFIN ID - ZDB-GENE-040822-8
Ensembl - ENSDARG00000002255
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 EPB41L3ENSGALG00000038678Gallus gallus
 Q9Y2J2ENSG00000082397Homo sapiens
 Q9WV92ENSMUSG00000024044Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
epb41l3b / erythrocyte membrane protein band 4.1-like 3b / Q9Y2J2* / EPB41L3* / erythrocyte membrane protein band 4.1 like 3*ENSDARG0000001991743
epb41a / erythrocyte membrane protein band 4.1a / EPB41* / P48193* / P11171* / erythrocyte membrane protein band 4.1*ENSDARG0000009928340
si:dkey-178k16.1 / Q9H4G0* / EPB41L1* / band 4.1-like protein 1 isoform d * / erythrocyte membrane protein band 4.1 like 1*ENSDARG0000007636440
EPB41L2 / si:ch73-18b11.1 / O43491* / O70318* / erythrocyte membrane protein band 4.1 like 2* / Mus musculus erythrocyte membrane protein band 4.1 like 2 (Epb41l2), transcript variant 3, mRNA.*ENSDARG0000009337439
epb41b / erythrocyte membrane protein band 4.1bENSDARG0000002901928
ptpn4a / protein tyrosine phosphatase, non-receptor type 4a / PTPN4* / P29074* / Q9WU22* / protein tyrosine phosphatase, non-receptor type 4* / Tyrosine-protein phosphatase non-receptor type 4 *ENSDARG0000000063123
ptpn4b / protein tyrosine phosphatase, non-receptor type 4b / PTPN4* / P29074* / Q9WU22* / protein tyrosine phosphatase, non-receptor type 4* / Tyrosine-protein phosphatase non-receptor type 4 *ENSDARG0000000018322
epb41l4a / erythrocyte membrane protein band 4.1 like 4A / P52963* / Q9HCS5* / Band 4.1-like protein 4A *ENSDARG0000004008720
epb41l5 / erythrocyte membrane protein band 4.1 like 5 / Q8BGS1* / Q9HCM4* / Band 4.1-like protein 5 *ENSDARG0000003232418
ptpn3 / protein tyrosine phosphatase, non-receptor type 3 / A2ALK8* / P26045*ENSDARG0000005578418
FRMD5 / si:ch211-69m14.1 / Q6P5H6* / Q7Z6J6* / FERM domain containing 5* / FERM domain-containing protein 5 *ENSDARG0000007594217
epb41l4b / erythrocyte membrane protein band 4.1 like 4B / Q9H329* / Q9JMC8* / Band 4.1-like protein 4B *ENSDARG0000006139817
frmd5 / FERM domain containing 5 / Q6P5H6* / Q7Z6J6* / FERM domain-containing protein 5 *ENSDARG0000007962217
frmd3 / FERM domain containing 3 / A2A2Y4* / Q8BHD4* / FERM domain-containing protein 3 *ENSDARG0000005988516


Protein motifs (from Interpro)
Interpro ID Name
 IPR000299  FERM domain
 IPR000798  Ezrin/radixin/moesin-like
 IPR007477  SAB domain
 IPR008379  Band 4.1, C-terminal
 IPR011993  PH-like domain superfamily
 IPR014352  FERM/acyl-CoA-binding protein superfamily
 IPR014847  FERM adjacent (FA)
 IPR018979  FERM, N-terminal
 IPR018980  FERM, C-terminal PH-like domain
 IPR019747  FERM conserved site
 IPR019748  FERM central domain
 IPR019749  Band 4.1 domain
 IPR029071  Ubiquitin-like domain superfamily
 IPR030691  Band 4.1-like protein 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001558 regulation of cell growth IEA
 biological_processGO:0007010 cytoskeleton organization IEA
 biological_processGO:0007016 cytoskeletal anchoring at plasma membrane IEA
 biological_processGO:0030866 cortical actin cytoskeleton organization IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005911 cell-cell junction IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005198 structural molecule activity IEA
 molecular_functionGO:0008092 cytoskeletal protein binding IEA


Pathways (from Reactome)
Pathway description
Neurexins and neuroligins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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