ENSDARG00000002949


Danio rerio

Features
Gene ID: ENSDARG00000002949
  
Biological name :ppp6c
  
Synonyms : ppp6c / protein phosphatase 6, catalytic subunit
  
Possible biological names infered from orthology : O00743 / Q9CQR6 / Serine/threonine-protein phosphatase 6 catalytic subunit
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 31983098
Gene end: 31995401
  
Corresponding Affymetrix probe sets: Dr.16126.1.S1_at (Zebrafish Array)   NM_201005_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000025917
NCBI entrez gene - 393980     See in Manteia.
RefSeq - NM_201005
RefSeq Peptide - NP_957299
swissprot - Q7ZUS7
ZFIN ID - ZDB-GENE-040426-949
Ensembl - ENSDARG00000002949
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PPP6CENSGALG00000001013Gallus gallus
 PPP6CENSG00000119414Homo sapiens
 Ppp6cENSMUSG00000026753Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004843  Calcineurin-like phosphoesterase domain, ApaH type
 IPR006186  Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
 IPR029052  Metallo-dependent phosphatase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001878 response to yeast IDA
 biological_processGO:0006470 protein dephosphorylation IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0004721 phosphoprotein phosphatase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000071906 sec24b / SEC24 homolog B, COPII coat complex component / O95487* / Sec24 related gene family, member B (S. cerevisiae)*  / reaction
 ENSDARG00000103516 sec24c / SEC24 homolog C, COPII coat complex component / P53992* / Sec24 related gene family, member C (S. cerevisiae)*  / reaction
 ENSDARG00000104375 sec24a / SEC24 homolog A, COPII coat complex component / O95486*  / reaction
 ENSDARG00000009023 ankrd28b / ankyrin repeat domain 28b / O15084* / Q505D1* / ANKRD28* / ankyrin repeat domain 28* / Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A *  / complex






 

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