ENSGALG00000001013


Gallus gallus

Features
Gene ID: ENSGALG00000001013
  
Biological name :PPP6C
  
Synonyms : PPP6C / protein phosphatase 6 catalytic subunit
  
Possible biological names infered from orthology : O00743 / Q9CQR6 / Serine/threonine-protein phosphatase 6 catalytic subunit
  
Species: Gallus gallus
  
Chr. number: 17
Strand: -1
Band:
Gene start: 10069935
Gene end: 10073726
  
Corresponding Affymetrix probe sets: Gga.1636.1.A1_s_at (Chicken Array)   Gga.2782.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000001493
NCBI entrez gene - 772354     See in Manteia.
RefSeq - NM_001079765
RefSeq Peptide - NP_001073233
swissprot - Q5ZIV0
Ensembl - ENSGALG00000001013
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ppp6cENSDARG00000002949Danio rerio
 PPP6CENSG00000119414Homo sapiens
 Ppp6cENSMUSG00000026753Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004843  Calcineurin-like phosphoesterase domain, ApaH type
 IPR006186  Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
 IPR029052  Metallo-dependent phosphatase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006470 protein dephosphorylation IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0004721 phosphoprotein phosphatase activity IEA
 molecular_functionGO:0004722 protein serine/threonine phosphatase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000011998 SEC24D / SEC24 homolog D, COPII coat complex component / O94855* / Sec24 related gene family, member D (S. cerevisiae)*  / reaction
 ENSGALG00000006417 SEC24A / Gallus gallus SEC24 homolog A, COPII coat complex component (SEC24A), mRNA. / O95486* / Q3U2P1* / Protein transport protein Sec24A * / SEC24 homolog A, COPII coat complex component*  / reaction
 ENSGALG00000007037 PPP6R3 / Q5F471 / Serine/threonine-protein phosphatase 6 regulatory subunit 3 / Q5H9R7* / Q922D4* / protein phosphatase 6 regulatory subunit 3*  / complex
 ENSGALG00000011226 ANKRD28 / ankyrin repeat domain 28 / O15084* / Q505D1* / Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A *  / complex






 

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