ENSDARG00000002988


Danio rerio

Features
Gene ID: ENSDARG00000002988
  
Biological name :tnnt2d
  
Synonyms : tnnt2d / troponin T2d, cardiac
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 20215964
Gene end: 20226584
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000048641
Ensembl peptide - ENSDARP00000119118
NCBI entrez gene - 574000     See in Manteia.
RefSeq - NM_001025179
RefSeq Peptide - NP_001020350
swissprot - F1QBR1
ZFIN ID - ZDB-GENE-050626-97
Ensembl - ENSDARG00000002988
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tnnt2e / troponin T2e, cardiacENSDARG0000004582283
tnnt2a / troponin T type 2a (cardiac)ENSDARG0000002061057
tnnt3b / troponin T type 3b (skeletal, fast) / TNNT3* / P45378* / troponin T3, skeletal, fast* / troponin T3, fast skeletal type*ENSDARG0000006845756
tnnt3a / troponin T type 3a (skeletal, fast) / TNNT3* / P45378* / troponin T3, skeletal, fast* / troponin T3, fast skeletal type*ENSDARG0000003027054
tnnt2b / troponin T type 2b (cardiac)ENSDARG0000010069454
tnnt2c / troponin T2c, cardiacENSDARG0000003224252
tnnt1 / troponin T type 1 (skeletal, slow) / P13805* / O88346* / troponin T1, skeletal, slow* / troponin T1, slow skeletal type*ENSDARG0000003795451


Protein motifs (from Interpro)
Interpro ID Name
 IPR001978  Troponin
 IPR027707  Troponin T


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006937 regulation of muscle contraction IEA
 biological_processGO:0045214 sarcomere organization IGI
 cellular_componentGO:0005861 troponin complex IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0009116 slow muscle cell slow muscle cell sarcomere absent , abnormal
slow muscle cell morphology , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr